| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 51 (0.790) +AGT |
42/194 | 0.6 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 85 | = 19737 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/617‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACATGAG < 85/19737‑19639 ||| CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAA > 2:245339/1‑101 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAG > 2:312659/1‑101 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGT < 2:49262/101‑1 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGT < 2:1184394/101‑1 gGGAGGGACATCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAG < 2:14820/100‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAG < 1:520454/101‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAG < 2:785454/101‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAG < 2:177365/101‑1 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGC > 2:785599/1‑101 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCA < 1:140381/101‑1 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCA < 1:524847/101‑1 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCA < 2:1509167/101‑1 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGT > 2:309918/1‑101 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGT > 1:883872/1‑101 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGT > 1:426757/1‑101 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGAC < 1:281695/101‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGAC > 1:959890/1‑101 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACG < 2:898253/101‑1 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTT < 1:1202203/101‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTA > 1:846561/1‑101 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGGGAAGACGCCGTTAAG > 1:360737/1‑101 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGT < 1:471541/101‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGT > 2:712131/1‑101 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGT < 2:265021/101‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTC > 1:419967/1‑101 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGG > 1:1690759/1‑101 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGCGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAA > 2:1626125/1‑101 AAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAAT < 1:357776/101‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCTTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAAT < 1:1697601/101‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAAT < 1:712136/101‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAAT > 1:252580/1‑101 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGT > 2:1592786/1‑101 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTG > 2:633815/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGAC < 2:1368106/101‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGAC > 1:617754/1‑101 CATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGT < 1:1025547/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTG < 2:229170/101‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGT < 1:312659/101‑1 CACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTG < 1:1003163/101‑1 ACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGC > 2:1404381/1‑101 ACTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGC > 2:341926/1‑101 CTAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCT > 1:457110/1‑101 TAAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTA > 1:884963/1‑101 AAATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGATGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAA > 2:425475/1‑101 ATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATG > 1:60752/1‑101 ATCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATG < 2:1038034/101‑1 TCAGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGG < 1:338483/101‑1 CAGCAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGAATCGTGCGGTGAAGACGCCGTTCAGAGGTGTCGGGCAAATGCCGTTGACGTGGCGATAATGGA > 2:1536206/1‑101 AGTAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGAC > 1:1266360/1‑101 TAAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACAT < 2:502101/101‑1 AAGTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACATG > 2:237266/1‑101 GTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACATGAG > 1:1052917/1‑101 GTTGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGGTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACATGAG > 2:505730/1‑101 ||| CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/617‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGCAGCATCACCAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGTCGGGCAAATGCCGTTGACGTGGTGCTAATGGACATGAG < 85/19737‑19639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |