| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 65 (0.980) | 57/200 | 0.1 | 94.9% | intergenic (–/–) | –/– | –/– |
| ? | 96 | 5651 = | 7 (0.110) | intergenic (–/–) | –/– | –/– | |||||
TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/93‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGC > 96/5651‑5749 TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCT < 2:1153736/101‑1TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCT < 1:1285526/101‑1 CACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTC < 2:478170/101‑1 ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCG < 1:223529/101‑1 CGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGG < 1:1008536/101‑1 CAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGAC < 2:1447219/101‑1 AAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACG > 2:888230/1‑101 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGT > 2:1617497/1‑101 GGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTA < 1:713390/101‑1 GGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTA < 1:1700907/101‑1 GCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTAC < 2:1562891/101‑1 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACG < 1:1086143/101‑1 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGG > 1:345278/1‑101 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTA < 2:1560285/101‑1 TTCAAAAGGGAATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTA > 2:448405/1‑101 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTAT > 1:964542/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATA < 1:444681/101‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACAT < 1:1503886/101‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACAT < 2:473935/101‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACAT < 1:1523648/101‑1 AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATG > 1:775180/1‑101 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTC < 2:709842/101‑1 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTC > 2:602997/1‑101 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTC > 2:597081/1‑101 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGA > 2:145076/1‑101 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACA > 2:1626948/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGC > 2:652375/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGGATACATGTCTGACAATGGCA > 2:301632/1‑101 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATC < 1:1340133/101‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCC > 1:1049853/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGGATACATGTCTGACAATGGCAGATACC > 2:947893/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGAAGATCCCAG < 1:997508/101‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGC < 1:826244/101‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCG < 1:1069537/101‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGT < 1:12365/101‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCGCAGCGGTCA < 2:816028/101‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCA > 2:279720/1‑101 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAA > 1:705704/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAAC < 1:1617503/101‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACA < 2:1443648/101‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAG > 1:851477/1‑101 CCATTTCATCTTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGG < 2:1482869/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCG < 2:403387/101‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGG > 2:1305876/1‑101 TCATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCA < 2:1405212/101‑1 ATCGTCCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGT < 1:1626954/101‑1 CCAACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGC > 1:1624774/1‑101 AACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGG > 1:1486475/1‑101 AACAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGG < 2:739834/101‑1 CAAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTC < 2:769980/101‑1 AAAATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCG < 2:939986/101‑1 AATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGG > 1:978483/1‑101 ATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGA > 2:1226632/1‑101 ATGGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGA > 2:692527/1‑101 GGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATA > 1:819916/1‑101 GGGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATA > 1:737285/1‑101 GGTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAG > 1:1384627/1‑101 GTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGT < 1:597086/101‑1 GTGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGT > 1:478521/1‑101 TGCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTT < 2:1624768/101‑1 GCAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGGCGGGATAGTTT > 2:101737/1‑101 CAGTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTT > 2:1159056/1‑101 GTACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCT < 2:1152946/101‑1 ACATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTG > 2:1212339/1‑101 CATTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGC < 2:18774/101‑1 TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/93‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGC > 96/5651‑5749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |