| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 62 (0.950) | 53/196 | 0.1 | 96.9% | intergenic (–/–) | –/– | –/– |
| ? | 4 | = 58128 | 4 (0.060) | intergenic (–/–) | –/– | –/– | |||||
GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTTGTCCGG < 4/58128‑58031 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATC < 1:588431/101‑1GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATC > 1:251653/1‑101 ttATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCA < 2:581999/99‑1 TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCA > 2:430335/1‑101 ATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACC > 2:1335484/1‑101 CACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCG < 1:142172/101‑1 ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGT > 1:1506925/1‑101 CTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAG < 1:1191047/101‑1 CAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGT < 1:334656/101‑1 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAAC < 1:1340714/101‑1 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAAC < 1:963733/101‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTA > 1:402977/1‑101 AAAGCGTATTTTGGCTTTGACATATTAGGGTCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCC < 2:1562967/101‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCA < 1:1303664/101‑1 AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGAGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCAC > 2:1427852/1‑101 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATG < 2:831451/101‑1 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAG < 2:1673875/101‑1 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTG > 1:1587880/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGG < 2:1400486/101‑1 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGG < 1:1547404/101‑1 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGG < 2:730606/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGCTACTCACACGAGATGGAGCTGTCCCC > 1:191778/1‑101 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCC > 1:107413/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCG > 2:179346/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAAAGGTACTCCCACGACATGGAGCTGGCCCCCG > 1:1112961/1‑101 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGT > 2:331891/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTG > 2:1109987/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTG > 1:1153531/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCCTG > 2:787913/1‑101 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGG < 2:1317936/101‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGC < 2:1428778/101‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCA > 2:1111889/1‑101 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAA > 1:1229944/1‑101 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAAC > 1:1661363/1‑101 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACC < 1:430340/101‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCA < 2:951854/101‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAG > 2:937557/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCG > 1:485401/1‑101 ATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCG > 1:118851/1‑101 ATTTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCG < 2:1252214/101‑1 TTCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTT > 1:662756/1‑101 TCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTA > 2:613546/1‑101 TCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTA < 2:1189372/101‑1 TCATCGTCCAACAAAATGGGTGCAGTACAATCACCGCCTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTA > 2:693312/1‑101 TCGTCCAACAAAATGGGTGCAGTACAATCGCCGCGTTCAGGGTGAAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCt < 2:23162/101‑2 CGTCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCA > 2:1404506/1‑101 TCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACA > 1:851853/1‑101 TCCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACA < 1:50164/101‑1 CCAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAA < 2:251653/101‑1 CAACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAA > 2:35352/1‑101 ACAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTGCTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACA < 2:1153526/101‑1 CAAAATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAG < 1:566649/101‑1 agATGGGTGCAGTTCAATCACCGCGTTCAGGGTGTAACGGTACACCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGAT < 1:554035/99‑1 AATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATG > 2:902127/1‑101 ATGGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGC < 1:788789/101‑1 GGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCAGGGCATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAG < 1:841818/101‑1 GGGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAG < 2:1145157/101‑1 GGTGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGT < 1:1629947/101‑1 TGCAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTT < 2:402972/101‑1 CAGTACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTTGT < 2:738597/101‑1 TACAATCACCGCGTTCAGGGTGTAATGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTTGTCCG > 1:1533359/1‑101 ACAATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTTGTCCGG < 1:1432785/101‑1 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caATCACCGCGTTCAGGGTGTAACGGTACTCCCACGACATGGAGCTGGCCCCCGTGGCAACCAGCGAACCGTTATCCACAAACAGATGCAGTTTGTCCGG < 4/58128‑58031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |