New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	180	= 7195	0 (0.000)	62 (0.970) +AGCG	53/192	0.1	100%	intergenic (–/–)	–/–	–/–
	?	84	1 =	0 (0.000)					intergenic (–/–)	–/–	–/–

GTGCTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  180/7097‑7195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGACATCTTTCTGC  >  84/1‑96                                                                                                    ||||                                                                                                 GTGCTTTGTTCATGCCGGATGCGGGGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAG                                                                                                    <  2:324008/101‑1    CTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGC                                                                                                 >  2:859392/1‑101     TTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCA                                                                                                >  1:1220409/1‑101     TTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCA                                                                                                >  2:84397/1‑101      TTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCAT                                                                                               <  1:117314/101‑1      TTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCAT                                                                                               >  2:484598/1‑101       TGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATC                                                                                              >  1:722906/1‑101        GTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCA                                                                                             <  2:1690415/101‑1         TTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAG                                                                                            >  2:1274151/1‑101          TCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGG                                                                                           <  2:224468/101‑1           CATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGC                                                                                          >  1:807158/1‑101            ATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCA                                                                                         <  2:748939/101‑1            ATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCA                                                                                         <  2:1285397/101‑1            ATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCA                                                                                         <  1:1633606/101‑1              GCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAAT                                                                                       <  1:1547653/101‑1               CCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATT                                                                                      <  1:799338/101‑1                       GGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTT                                                                              >  1:1194743/1‑101                         gcgtAACCCTTTGTCCCGCCAAAAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTA                                                                            <  2:831887/97‑1                         CGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTA                                                                            >  2:970876/1‑101                          GTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAA                                                                           >  1:642933/1‑101                          GTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAA                                                                           >  1:1604768/1‑101                                 CTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTC                                                                    <  2:591967/101‑1                                    TGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTC                                                                 <  1:321067/101‑1                                      TCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATACCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTT                                                               <  1:25940/101‑1                                      TCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTT                                                               <  2:958020/101‑1                                        CGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGT                                                             <  2:994881/101‑1                                        CGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGT                                                             <  1:1554463/101‑1                                           CCAACACAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCA                                                          >  2:884870/1‑101                                           CCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCA                                                          <  2:403334/101‑1                                           CCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCA                                                          >  1:1068062/1‑101                                           CCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCA                                                          >  1:1204300/1‑101                                             AACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATC                                                        >  1:1064541/1‑101                                             AACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATC                                                        <  1:1667699/101‑1                                              ACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCA                                                       >  1:605606/1‑101                                              ACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCA                                                       <  2:1270458/101‑1                                                   AGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCT                                                  >  2:1279706/1‑101                                                       aGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGGGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCA                                              <  2:1543569/100‑1                                                        GTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAG                                             <  2:173029/101‑1                                                         TAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGG                                            >  1:1600458/1‑101                                                          AAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGT                                           >  1:1195346/1‑101                                                           AATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTC                                          >  1:861235/1‑101                                                           AATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTC                                          <  1:84397/101‑1                                                            ATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCA                                         <  1:311313/101‑1                                                               CAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCG                                      <  2:782242/101‑1                                                               CAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCG                                      >  2:863438/1‑101                                                                 ATATATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAA                                    >  1:450328/1‑101                                                                    TATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGG                                 <  2:240582/101‑1                                                                     ATTGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGG                                >  1:739811/1‑101                                                                       TGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAGTGGGTg                              >  2:169358/1‑100                                                                       TGCTGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTT                              <  2:1065107/101‑1                                                                          TGAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTA                           >  1:384590/1‑101                                                                           GAAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTAC                          <  1:1553828/101‑1                                                                            AAATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACT                         >  2:1234407/1‑101                                                                             AATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTT                        >  1:456255/1‑101                                                                              ATAACGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTC                       <  1:292226/101‑1                                                                                    TAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCA                 >  2:864129/1‑101                                                                                    TAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCA                 >  1:667131/1‑101                                                                                     AGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCAC                <  1:859397/101‑1                                                                                      GGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACC               <  2:807153/101‑1                                                                                        CCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGA             >  1:1543670/1‑101                                                                                                GCGTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGACATCTTTC     <  2:642928/101‑1                                                                                                  GTAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGACATCTTTCTG   <  2:1220404/101‑1                                                                                                   TAGCGCATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGACATCTTTCTGC  <  1:1077130/101‑1                                                                                                    ||||                                                                                                 GTGCTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  180/7097‑7195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCAGGCAATTTTACGTTTTAATCACTTCTTCTTGTTCATCATCGCTTTCAGGTCAGCGAATGGGTTGTACTTCGCTTCACCGACATCTTTCTGC  >  84/1‑96

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.