New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 153 | = 9595 | 39 (0.590) | 28 (0.420) | 23/200 | 2.0 | 59.0% | intergenic (–/–) | –/– | –/– |
? | 174 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
ATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 153/9543‑9595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA > 174/1‑99 atcCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACA > 2:1402098/4‑101 cCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAAC > 2:924890/2‑101 cCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAAC < 2:1342430/100‑1 aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCC > 1:1576982/2‑101 aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCC < 2:851330/100‑1 CCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCG < 1:966532/101‑1 CGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGA > 1:1563893/1‑101 CGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGA < 2:1485653/101‑1 GATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGAC > 1:1174499/1‑101 ATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACC > 2:1384113/1‑101 TGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCC < 2:1326066/101‑1 GCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCT < 2:1118538/101‑1 CCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTA < 1:1648441/101‑1 TGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAAT < 2:744961/101‑1 cCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATA > 1:435107/2‑101 CGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAA < 1:927589/101‑1 GCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAAC < 1:1199389/101‑1 GACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAAT < 1:817829/101‑1 ACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATG < 2:1512863/101‑1 CGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGA < 2:1312654/101‑1 GCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGAC < 2:1514465/101‑1 TTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGA < 1:1347446/101‑1 TATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGAC < 1:957449/101‑1 GGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACAT < 1:605700/101‑1 CCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATaa > 2:486552/1‑99 CTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAG > 1:721915/1‑101 cggGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGA > 2:516914/4‑101 gGATGTACTGAACTGTAGGTGGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA < 2:163637/100‑1 ATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 153/9543‑9595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA > 174/1‑99 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |