| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 62 | 21,225 | 0 | C | T | 64.8% | 132.4 / 123.3 | 128 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (23/22); new base T (44/39); total (67/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 133 total aligned reads displayed.
TAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCAT > 62/21128‑21324 | taaatCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGcc > 2:656821/1‑101 (MQ=255) aaatCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCt > 2:106502/1‑101 (MQ=255) atCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTgg < 1:539083/101‑2 (MQ=255) tCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTgga > 1:291241/1‑99 (MQ=255) tCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTgga < 1:539549/101‑3 (MQ=255) caTATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTggaagc > 1:77269/1‑96 (MQ=255) atatTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGaagca > 2:1656308/1‑101 (MQ=255) tatTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGaagcag < 1:680087/101‑1 (MQ=255) tatTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGaagcag < 1:683695/101‑1 (MQ=255) atTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGa > 2:997655/1‑101 (MQ=255) atTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGa < 1:1344842/101‑1 (MQ=255) ttATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACa > 1:181964/1‑101 (MQ=255) tgaaatatatatAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAAt > 1:361004/9‑101 (MQ=17) tGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAAc > 1:807548/1‑101 (MQ=255) tGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAAc < 1:126693/101‑1 (MQ=255) aatatatatAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAAc < 2:527989/96‑1 (MQ=21) aatatatatAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAAc < 1:482056/96‑1 (MQ=18) gTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAAccc < 1:82890/101‑1 (MQ=38) gTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAAccc < 1:1057908/101‑1 (MQ=38) tGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCg < 1:83784/101‑1 (MQ=38) atatAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGAt < 2:270367/101‑1 (MQ=255) atatAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGAt > 1:1083292/1‑101 (MQ=255) atatAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGAt > 2:1185458/1‑101 (MQ=255) atatAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGAt > 1:1200613/1‑101 (MQ=38) tataAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATa > 1:829674/1‑101 (MQ=255) ataAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATaa < 1:1502439/101‑1 (MQ=38) ataAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATaa > 1:1180817/1‑101 (MQ=38) ataAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATaa > 1:200495/1‑101 (MQ=38) taAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATaaa < 2:1581668/101‑1 (MQ=255) atatTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACa > 1:389643/1‑101 (MQ=37) atTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAACACAAg > 2:1252474/1‑101 (MQ=39) atTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAg > 1:480282/1‑101 (MQ=37) atTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAg > 1:881829/1‑101 (MQ=25) tttCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGa > 2:994050/1‑101 (MQ=255) ttCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGAt < 2:1061470/101‑1 (MQ=255) ttCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGAt > 2:851083/1‑101 (MQ=37) ccTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGa < 1:320679/101‑1 (MQ=38) cTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAg > 1:212909/1‑101 (MQ=255) aaTTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCa < 1:1114914/101‑1 (MQ=38) aTTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAg < 2:963729/101‑1 (MQ=255) aTTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAg < 2:804413/101‑1 (MQ=255) aTTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAg > 1:1345569/1‑101 (MQ=255) aTTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCTTGTCAGCAGACAAATGACCCGATATAACAAGGATGAGCAg > 1:855110/1‑101 (MQ=37) aTTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAg > 2:497866/1‑101 (MQ=38) ttGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGa > 2:1164779/1‑101 (MQ=38) tGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGAt > 2:1200273/1‑101 (MQ=255) gTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATg > 1:1045900/1‑101 (MQ=255) tttCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGa < 2:1083287/101‑1 (MQ=255) ttcttATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGa < 1:1262258/97‑1 (MQ=255) ttcttATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGa > 1:416436/5‑101 (MQ=255) ttCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAg < 2:654984/101‑1 (MQ=255) ttATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCg < 2:205521/100‑1 (MQ=255) cTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCg > 2:321660/1‑101 (MQ=255) cTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCg > 2:560927/1‑101 (MQ=255) tATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCgg > 1:1566591/1‑101 (MQ=255) tATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAACGATGAGCAGATCAGCgg > 2:619620/1‑101 (MQ=255) atctgtcagATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGa > 1:1671467/9‑101 (MQ=255) aTCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGa > 2:550133/1‑101 (MQ=255) cTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGaaa > 1:1273717/1‑101 (MQ=255) cTGATGGATATCTCACTTAAGGCTTTCTTATAAACCTGTAGGGTTTTGCCTGGAAACAGACAAATCACCCGATAAAACAACGCTCGGCAGATGCGCGGaaa > 2:517444/1‑101 (MQ=255) tgacagATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGaaaa < 2:1552962/96‑1 (MQ=255) tgacagATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGaaaa > 2:380882/6‑101 (MQ=255) tGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGaaaa < 1:414521/101‑1 (MQ=255) tGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGaaaa < 2:439779/101‑1 (MQ=255) gacagATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAAc < 2:316655/97‑1 (MQ=255) gATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGGAAATGGGCGGAAAAc > 2:877384/1‑101 (MQ=255) aTGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAAcc < 2:574041/101‑1 (MQ=255) cagATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATACCCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCg < 2:285957/99‑1 (MQ=255) ggATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCgg < 2:1110001/101‑1 (MQ=255) gATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGGTGAGCGGAAAACCGGc < 2:1655210/101‑1 (MQ=255) gATATCTCACTTAAGGCTTTCTTATAAATCTGCAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGc > 2:1101191/1‑101 (MQ=255) atatCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGcg < 1:1693276/101‑2 (MQ=255) aCTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTc > 1:444797/1‑101 (MQ=255) cTTAAGGCTTTCTTATAAATCTGTAGTGTTTCGCCTGTCACCAGACAAATAACCCGATAAAACAAGGATGAGCAGATAAGCGAACAACCGGcgggcggtca > 2:1115793/1‑92 (MQ=255) ttAAGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAg < 1:625136/101‑1 (MQ=255) tAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAgg < 1:497871/101‑1 (MQ=255) aGGCTTTCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGc < 2:200495/101‑1 (MQ=255) ggCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCg > 1:402055/1‑101 (MQ=255) tttCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACa > 1:1604558/1‑101 (MQ=255) ttCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt > 1:774596/1‑101 (MQ=255) ttCTTATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt < 2:1581280/101‑1 (MQ=255) ttCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACAt < 2:1671461/101‑1 (MQ=255) ttATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGAc < 1:656826/101‑1 (MQ=255) ttATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGAc > 1:1308271/1‑101 (MQ=255) ttATAAATCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGAc < 2:952957/101‑1 (MQ=255) ttATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGAc < 1:1236819/101‑1 (MQ=255) ttATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGAc < 2:1357470/101‑1 (MQ=255) ataAATCTGTAGGATTTTGCCTGGAAGAAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGc > 2:782159/1‑101 (MQ=38) taAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCa < 2:240478/101‑1 (MQ=255) aaaTCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAg > 2:458115/1‑101 (MQ=255) aaTCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGt > 1:341716/1‑101 (MQ=255) aaTCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGt < 2:1247775/101‑1 (MQ=255) tCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTAt < 1:9390/101‑1 (MQ=255) tCTGTAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTAt > 2:705279/1‑101 (MQ=38) tGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATgg < 2:881824/101‑1 (MQ=255) gTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGc > 2:1166578/1‑101 (MQ=255) tAGGGTTTTGCCTGGAAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCg < 2:1566585/101‑1 (MQ=255) aGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCgg < 1:1653287/101‑1 (MQ=255) ggTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTa < 2:1363425/101‑1 (MQ=255) tCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCAt < 2:389638/101‑1 (MQ=255) | TAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTGTTTCTATCTGATGGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCAT > 62/21128‑21324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |