Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*417000CT58.5% 65.6 / 144.7 123intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (31/20);  new base T (46/26);  total (77/46)
Fisher's exact test for biased strand distribution p-value = 8.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

TCACCATCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAG  >  41/600‑797
                                                                                                    |                                                                                                 
tCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCAcc                                                                                                   <  1:1285323/101‑1 (MQ=255)
 cACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGCAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCg                                                                                                  >  2:1115013/1‑101 (MQ=255)
  aCCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCgg                                                                                                 >  1:940187/1‑101 (MQ=255)
   ccATCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGt                                                                                                <  1:1329779/101‑1 (MQ=255)
   ccATCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGt                                                                                                <  2:379179/101‑1 (MQ=255)
    cATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtg                                                                                               <  2:1467993/101‑1 (MQ=255)
     aTCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGtgc                                                                                              >  1:1257460/1‑101 (MQ=255)
     aTCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGtgc                                                                                              >  2:685450/1‑101 (MQ=255)
     aTCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgc                                                                                              >  2:149219/1‑101 (MQ=255)
     aTCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgc                                                                                              >  1:292241/1‑101 (MQ=255)
     aTCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgc                                                                                              >  1:1604544/1‑101 (MQ=255)
      tCAACACTTCTCACGTTGAATACGACCCCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgct                                                                                             <  2:1049474/101‑1 (MQ=255)
       cAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGtgctg                                                                                            >  1:1482891/1‑101 (MQ=255)
        aaCACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGtgctgc                                                                                           >  2:1310751/1‑101 (MQ=255)
            cTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAg                                                                                       <  1:1153593/101‑1 (MQ=255)
              tctcACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGAt                                                                                     <  1:1669829/101‑1 (MQ=255)
                tcACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATgg                                                                                   >  1:775486/1‑101 (MQ=255)
                 cACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGa                                                                                  <  1:1290930/101‑1 (MQ=255)
                  aCGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACAGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGAc                                                                                 <  1:1117797/101‑1 (MQ=255)
                  aCGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGAc                                                                                 >  1:1503096/1‑101 (MQ=255)
                   cGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACg                                                                                >  1:311522/1‑101 (MQ=255)
                    gTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACgg                                                                               <  2:1598082/101‑1 (MQ=255)
                    gTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACgg                                                                               >  2:299059/1‑101 (MQ=255)
                       gAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGgcgc                                                                            >  1:1284979/1‑101 (MQ=255)
                            tGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATcc                                                                       >  1:178498/1‑101 (MQ=255)
                            cgACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATcc                                                                       <  2:13758/100‑1 (MQ=255)
                             gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt                                                                      >  1:1108670/1‑101 (MQ=255)
                              acacCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTg                                                                     >  2:210200/1‑101 (MQ=255)
                                cccccGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGt                                                                   <  2:1269363/100‑1 (MQ=255)
                                acCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGt                                                                   >  2:370181/1‑101 (MQ=255)
                                  cccGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAg                                                                 >  2:244917/1‑101 (MQ=255)
                                    cGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGtt                                                               <  1:488783/101‑1 (MQ=255)
                                     gACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtg                                                              >  1:1655205/1‑101 (MQ=255)
                                      aCCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgc                                                             >  2:736713/1‑101 (MQ=255)
                                        ccGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctg                                                           >  2:147693/1‑101 (MQ=255)
                                        ccGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctg                                                           <  2:781018/101‑1 (MQ=255)
                                        ccGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctg                                                           >  2:1151149/1‑101 (MQ=255)
                                         cGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctgc                                                          >  2:1640385/1‑101 (MQ=255)
                                         cGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctgc                                                          >  2:840671/1‑101 (MQ=255)
                                         cGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTtgctgc                                                          >  2:174717/1‑101 (MQ=255)
                                          gTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCg                                                         >  2:118874/1‑101 (MQ=255)
                                          gTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCg                                                         >  2:1584928/1‑101 (MQ=255)
                                          gTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCg                                                         >  1:1011485/1‑101 (MQ=255)
                                             aCTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACt                                                      <  2:1656104/101‑1 (MQ=255)
                                             aCTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACt                                                      >  1:515607/1‑101 (MQ=255)
                                              cTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCACGATCCTGATAGTTGCTGCGACTg                                                     >  2:1145884/1‑101 (MQ=255)
                                               tACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGa                                                    <  1:1121459/101‑1 (MQ=255)
                                                acgctgccGTAGACTGCCCGGGGCACGTAGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGAc                                                   <  1:174717/94‑1 (MQ=255)
                                                aCGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGAc                                                   <  2:1257455/101‑1 (MQ=255)
                                                 cGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACg                                                  <  1:1623614/101‑1 (MQ=255)
                                                    acacGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGcc                                               >  1:195194/1‑101 (MQ=255)
                                                      acGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCg                                             >  1:982375/1‑101 (MQ=255)
                                                      acGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCg                                             >  1:1584961/1‑101 (MQ=255)
                                                        gTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGAt                                           <  2:616224/101‑1 (MQ=255)
                                                        gTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGAt                                           <  2:160370/101‑1 (MQ=255)
                                                        gTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGAt                                           <  1:1072348/101‑1 (MQ=255)
                                                        gTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGAt                                           <  1:380031/101‑1 (MQ=255)
                                                          aGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGc                                         >  1:680894/1‑101 (MQ=255)
                                                           gACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGcc                                        >  2:621049/1‑101 (MQ=255)
                                                           gACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGcc                                        <  1:611849/101‑1 (MQ=255)
                                                           gACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGcc                                        >  1:802730/1‑101 (MQ=255)
                                                             cTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGc                                      >  1:1425956/1‑101 (MQ=255)
                                                               gCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAg                                    <  2:1153229/101‑1 (MQ=255)
                                                                cccGGGGCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGa                                   >  2:353152/1‑101 (MQ=255)
                                                                    gggCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCg                               <  2:292241/101‑1 (MQ=255)
                                                                      gCACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTg                             <  1:1586092/101‑1 (MQ=255)
                                                                       cACGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGa                            >  2:1305109/1‑101 (MQ=255)
                                                                       cACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGa                            >  1:1552405/1‑101 (MQ=255)
                                                                        aCGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAg                           >  2:412286/1‑101 (MQ=255)
                                                                        aCGCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAg                           >  1:809343/1‑101 (MQ=255)
                                                                          gCCGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGca                         >  2:935379/1‑101 (MQ=255)
                                                                          gCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGca                         >  1:907230/1‑101 (MQ=255)
                                                                           ccGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGcac                        <  1:170101/101‑1 (MQ=255)
                                                                           ccGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGcac                        >  2:190832/1‑101 (MQ=255)
                                                                            cGACTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGcaca                       <  1:1435987/101‑1 (MQ=255)
                                                                              aCTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATc                     >  2:877493/1‑101 (MQ=255)
                                                                              aCTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATc                     >  2:102788/1‑101 (MQ=255)
                                                                              aCTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATc                     >  1:1241596/1‑101 (MQ=255)
                                                                               cTATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGACCACATcc                    <  1:1042387/101‑1 (MQ=255)
                                                                               cTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATcc                    <  1:71557/101‑1 (MQ=255)
                                                                                tATGTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCct                   >  1:915884/1‑101 (MQ=255)
                                                                                   gTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCctgct                >  1:1538883/1‑101 (MQ=255)
                                                                                   gTTAAAAACATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCctgct                >  1:1031831/1‑101 (MQ=255)
                                                                                    ttAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCctgctg               >  1:366905/1‑101 (MQ=255)
                                                                                      aaaaaCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTggg             >  2:585201/1‑101 (MQ=255)
                                                                                       aaaaCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgt            >  1:1522898/1‑101 (MQ=255)
                                                                                        aaaCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtc           >  1:588669/1‑101 (MQ=255)
                                                                                        aaaCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtc           <  2:16055/101‑1 (MQ=255)
                                                                                          aCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtcgt         <  2:1584955/101‑1 (MQ=255)
                                                                                          aCATGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtcgt         >  1:816972/1‑101 (MQ=255)
                                                                                          aCATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGgtcgt         <  2:795871/101‑1 (MQ=255)
                                                                                            aTGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCa       >  1:1583937/1‑101 (MQ=255)
                                                                                            aTGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCa       >  1:516122/1‑101 (MQ=255)
                                                                                            aTGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCa       >  2:1565271/1‑101 (MQ=255)
                                                                                             tGATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAg      >  1:1430422/1‑101 (MQ=255)
                                                                                             tGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAg      <  2:102585/101‑1 (MQ=255)
                                                                                              gATCACTGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAgg     <  1:1151154/101‑1 (MQ=255)
                                                                                              gATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAgg     <  1:102788/101‑1 (MQ=255)
                                                                                                tCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTa   <  2:1672899/101‑1 (MQ=255)
                                                                                                 cACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAg  >  2:900221/1‑101 (MQ=255)
                                                                                                    |                                                                                                 
TCACCATCAACACTTCTCACGTTGAATATGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAG  >  41/600‑797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: