New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 86 | = 15079 | 69 (1.030) | 31 (0.500) +G |
19/198 | 3.2 | 47.6% | intergenic (–/–) | –/– | –/– |
? | 90 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
Rejected: Coverage evenness skew score above cutoff. |
‑‑‑‑‑‑‑‑‑‑CGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTTCTGCCTC > 90/1‑99 | ggcaatgttgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGttttt > 1:321956/11‑101 (MQ=255) aatgttgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTtct > 1:930102/8‑101 (MQ=255) aatgttgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTtct > 2:1651089/8‑101 (MQ=255) atgttgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCTACACATCCACTGATTTTtctg > 1:256465/7‑101 (MQ=255) gttgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTAATGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTtctgtc > 1:1359180/5‑99 (MQ=255) tgcGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTtctgcctc < 2:313636/99‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑CGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACATCCACTGTTTTTTCTGCCTC > 90/1‑99 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |