| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 57 (0.070) +AGTTGGCAGCATCACC |
47/168 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 55 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAGAGA > 55/1‑101 | tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCt < 1:1466396‑M2/2‑1 (MQ=255)tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCt < 2:682607‑M2/2‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGAc > 2:875079‑M2/97‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaataagtaagttggcagcatcaccCTGAc > 2:804043‑M2/97‑101 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACcaca < 1:838850‑M2/9‑1 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAAt < 1:310506‑M2/11‑1 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAAt < 1:389396‑M2/11‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCt < 2:1508364‑M2/14‑1 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTg > 2:404616‑M2/87‑101 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTg > 2:3477‑M2/87‑101 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGt > 2:614817‑M2/86‑101 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGtt < 2:1672306‑M2/17‑1 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGa > 1:1611531‑M2/83‑101 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAg < 2:530889‑M2/20‑1 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGtt > 2:668473‑M2/79‑101 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGtt > 2:949702‑M2/79‑101 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGAcc > 2:683899‑M2/75‑101 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGAcc > 2:1266897‑M2/75‑101 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCAt < 2:534213‑M2/29‑1 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCAt > 2:1636595‑M2/73‑101 (MQ=255) tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCAtt < 1:324782‑M2/30‑1 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTaa > 1:1091976‑M2/70‑101 (MQ=255) aaacagaagccactggagcccctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAAc < 2:147912‑M2/33‑1 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCAt < 2:797545‑M2/36‑1 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCAt < 2:192765‑M2/36‑1 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATa < 1:1075203‑M2/37‑1 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAg < 2:743946‑M2/38‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGc > 1:1294121‑M2/63‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGcc > 2:750118‑M2/62‑101 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCa < 1:1535497‑M2/41‑1 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATa < 1:558750‑M2/43‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATAc > 1:537641‑M2/58‑101 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATAc < 1:1134833‑M2/44‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTg < 1:1209922‑M2/46‑1 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCAt < 2:1611525‑M2/49‑1 (MQ=255) gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATg < 2:853519‑M2/50‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGtt < 1:404621‑M2/52‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTg > 1:1098733‑M2/49‑101 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTg > 1:374036‑M2/49‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTgg < 2:564992‑M2/54‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTgg > 1:895314‑M2/48‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTgg < 2:1674416‑M2/54‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTgggg > 2:1448828‑M2/46‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTggggg > 1:1537453‑M2/45‑101 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGa > 1:548024‑M2/44‑101 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACt < 1:479710‑M2/60‑1 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGa > 1:635527‑M2/40‑101 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGa > 1:1121835‑M2/40‑101 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCt > 2:1278232‑M2/36‑101 (MQ=255) catacactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGc > 1:1090245‑M2/34‑101 (MQ=255) acactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCAt > 1:900463‑M2/31‑101 (MQ=255) cactaaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCAtt < 1:591754‑M2/72‑1 (MQ=255) aaatcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATc < 1:1436812‑M2/76‑1 (MQ=255) atcagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGc > 2:1456749‑M2/24‑101 (MQ=255) cagtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTa > 2:422632‑M2/22‑101 (MQ=255) gtaagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAAt < 2:374036‑M2/82‑1 (MQ=255) taagttggcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAAtg > 1:559684‑M2/19‑101 (MQ=255) cgcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAg > 2:1126248‑M2/13‑101 (MQ=255) gcagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATCCTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGt < 2:892051‑M2/90‑1 (MQ=255) cagcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGtc > 1:79856‑M2/11‑101 (MQ=255) agcatcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGtct > 1:802870‑M2/10‑101 (MQ=255) catcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTctct > 1:256166‑M2/8‑101 (MQ=255) atcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTg > 2:1101801‑M2/7‑101 (MQ=255) atcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTg > 1:1456990‑M2/7‑101 (MQ=255) atcaccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTg > 2:1441178‑M2/7‑101 (MQ=255) ccCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAaga < 2:461513‑M2/99‑1 (MQ=255) cTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCCGTCTCTGAAgaga > 2:1700878/1‑101 (MQ=255) cTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAgaga > 2:1147918/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAGAGA > 55/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |