New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 204 1 =0 (0.000)60 (1.080)
+GTAGGCCTGATAAGACGCGTC
49/158 0.1 100% intergenic (–/–) –/– –/–
?58 = 26029 0 (0.000)intergenic (–/–) –/– –/–

CACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  58/25929‑26029
                                                                                                    |                                                                                                  
caccaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCt                                                                                                    <  1:1401204/101‑1 (MQ=255)
caccaATGTTTCTTTTTAACGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCt                                                                                                    >  2:1060295/1‑101 (MQ=255)
 aCCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTg                                                                                                   <  2:924739‑M2/101‑2 (MQ=255)
  ccAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTga                                                                                                  <  1:1363726‑M2/101‑3 (MQ=255)
  ccAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTga                                                                                                  >  2:118855‑M2/1‑99 (MQ=255)
   cAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgac                                                                                                 >  1:455758‑M2/1‑98 (MQ=255)
    aaTGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacg                                                                                                <  1:811779‑M2/101‑5 (MQ=255)
       gTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgt                                                                                             >  2:460487‑M2/1‑94 (MQ=255)
        tttCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtt                                                                                            <  1:1579145‑M2/101‑9 (MQ=255)
         ttCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtct                                                                                           <  2:4186‑M2/101‑10 (MQ=255)
          tCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtctt                                                                                          >  2:519158‑M2/1‑91 (MQ=255)
          tCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtctt                                                                                          >  2:140677‑M2/1‑91 (MQ=255)
              tttAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatca                                                                                      >  1:1097856‑M2/1‑87 (MQ=255)
              tttAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatca                                                                                      <  1:329105‑M2/101‑15 (MQ=255)
              tttAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatca                                                                                      >  1:148394‑M2/1‑87 (MQ=255)
                  aTGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcc                                                                                  >  1:1265073‑M2/1‑83 (MQ=255)
                    gACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggccta                                                                                <  1:64107‑M2/101‑21 (MQ=255)
                    gACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggccta                                                                                <  1:1138163‑M2/101‑21 (MQ=255)
                     aCATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctac                                                                               >  1:1095771‑M2/1‑80 (MQ=255)
                     aCATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctac                                                                               <  2:612435‑M2/101‑22 (MQ=255)
                       aTCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacat                                                                             <  2:454919‑M2/101‑24 (MQ=255)
                        tCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacata                                                                            <  2:954889‑M2/101‑25 (MQ=255)
                         ccATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatac                                                                           >  2:1117099‑M2/1‑76 (MQ=255)
                          cATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacg                                                                          <  1:447689‑M2/101‑27 (MQ=255)
                          cATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacg                                                                          <  1:414203‑M2/101‑27 (MQ=255)
                           aTGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgt                                                                         <  2:847822‑M2/101‑28 (MQ=255)
                           aTGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgt                                                                         <  2:711824‑M2/101‑28 (MQ=255)
                              gggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttc                                                                      >  2:1537841‑M2/1‑71 (MQ=255)
                               ggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcg                                                                     <  1:1270904‑M2/101‑32 (MQ=255)
                               ggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcg                                                                     <  2:1373899‑M2/101‑32 (MQ=255)
                                gTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcgg                                                                    <  1:1703427‑M2/101‑33 (MQ=255)
                                      ccTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgt                                                              >  2:587967‑M2/1‑63 (MQ=255)
                                       cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgta                                                             >  2:1511286‑M2/1‑62 (MQ=255)
                                        tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtag                                                            >  1:1039701‑M2/1‑61 (MQ=255)
                                          aTTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggc                                                          >  2:1363720‑M2/1‑59 (MQ=255)
                                            tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccg                                                        <  2:105251‑M2/101‑45 (MQ=255)
                                            tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccg                                                        >  2:471283‑M2/1‑57 (MQ=255)
                                               aGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggac                                                     <  1:334478‑M2/101‑48 (MQ=255)
                                               aGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgagtcttatcacgcctacatacgttttggttttgtaggccgtac                                                     <  2:257983‑M2/101‑48 (MQ=255)
                                                ggACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggaca                                                    <  1:88189‑M2/101‑49 (MQ=255)
                                                ggACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggaca                                                    >  1:924744‑M2/1‑53 (MQ=255)
                                                 gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaa                                                   <  2:1515292‑M2/101‑50 (MQ=255)
                                                    ggATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggc                                                >  1:818779‑M2/1‑49 (MQ=255)
                                                    ggATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggc                                                <  2:1642684‑M2/101‑53 (MQ=255)
                                                     gATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcg                                               <  2:1212629‑M2/101‑54 (MQ=255)
                                                     gATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcg                                               >  1:1497357‑M2/1‑48 (MQ=255)
                                                      aTAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgt                                              <  1:1405112‑M2/101‑55 (MQ=255)
                                                        aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTtacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgatc                                            <  2:1047048‑M2/101‑57 (MQ=255)
                                                        aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttc                                            >  2:753711‑M2/1‑45 (MQ=255)
                                                         aGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttca                                           >  1:1515429‑M2/1‑44 (MQ=255)
                                                         aGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttca                                           >  1:434299‑M2/1‑44 (MQ=255)
                                                             tttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgcc                                       <  1:250407‑M2/101‑62 (MQ=255)
                                                              ttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccg                                      <  1:798718‑M2/101‑63 (MQ=255)
                                                              ttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccg                                      <  2:309902‑M2/101‑63 (MQ=255)
                                                               tCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgc                                     <  1:552010‑M2/101‑64 (MQ=255)
                                                                cACGCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgca                                    <  2:497157‑M2/101‑65 (MQ=255)
                                                                   gCCTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatcc                                 <  2:137483‑M2/101‑68 (MQ=255)
                                                                    ccTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccg                                <  2:787486‑M2/101‑69 (MQ=255)
                                                                    ccTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccg                                <  2:1183723‑M2/101‑69 (MQ=255)
                                                                    ccTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccg                                <  2:306109‑M2/101‑69 (MQ=255)
                                                                     cTTATCCGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccgg                               <  1:1658944‑M2/101‑70 (MQ=255)
                                                                          ccGACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcattt                          <  2:768028‑M2/101‑75 (MQ=255)
                                                                            gACAACAACTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttca                        >  2:545621‑M2/1‑25 (MQ=255)
                                                                               aacaacTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacag                     <  2:353272‑M2/101‑80 (MQ=255)
                                                                                 caacTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagca                   >  2:1496432‑M2/1‑20 (MQ=255)
                                                                                 caacTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagca                   >  1:397977‑M2/1‑20 (MQ=255)
                                                                                  aacTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcat                  <  1:985100‑M2/101‑83 (MQ=255)
                                                                                    cTGCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcatta                <  2:1147897‑M2/101‑85 (MQ=255)
                                                                                      gCCTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattact              >  2:485151‑M2/1‑15 (MQ=255)
                                                                                       ccTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattactt             >  1:497162‑M2/1‑14 (MQ=255)
                                                                                        cTGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttg            <  2:964108‑M2/101‑89 (MQ=255)
                                                                                         tGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttgg           <  2:1683898‑M2/101‑90 (MQ=255)
                                                                                         tGATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttgg           <  1:1523286‑M2/101‑90 (MQ=255)
                                                                                          gATGCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggt          >  1:270442‑M2/1‑11 (MQ=255)
                                                                                             gCGACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgat       >  1:2486‑M2/1‑8 (MQ=255)
                                                                                               gACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgatac     >  2:329105‑M2/1‑6 (MQ=255)
                                                                                               gACGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgatac     >  1:1207080‑M2/1‑6 (MQ=255)
                                                                                                aCGCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgatacg    >  1:954894‑M2/1‑5 (MQ=255)
                                                                                                  gCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgatacgag  <  2:1016899‑M2/101‑99 (MQ=255)
                                                                                                  gCTgacgcgtcttatcaggcctacatacgtttcggttttgtaggccggacaaggcgttcacgccgcatccggcatttcacagcattacttggtgatacgag  >  1:1373905‑M2/1‑3 (MQ=255)
                                                                                                    |                                                                                                  
CACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  58/25929‑26029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.