| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 177 | 2 = | 1 (0.020) | 60 (1.080) +TAATGACAGC |
50/180 | 0.1 | 99.3% | intergenic (–/–) | –/– | –/– |
| ? | 40 | = 32569 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CCAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 40/32472‑32569 | ccAGCGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgct > 1:1332205‑M2/1‑98 (MQ=255)ccAAGGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgct < 1:1347039‑M2/101‑4 (MQ=255) cAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctg > 1:37200‑M2/1‑97 (MQ=255) cAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctg < 1:600588‑M2/101‑5 (MQ=255) cAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctg > 1:530054‑M2/1‑97 (MQ=255) cgccgcCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtca > 1:156422‑M2/1‑94 (MQ=255) gccgccTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcat < 2:179760‑M2/101‑9 (MQ=255) gccgccTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcat > 2:595035‑M2/1‑93 (MQ=255) gccTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattac > 2:698365‑M2/1‑90 (MQ=255) cTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccg < 2:1330378‑M2/101‑14 (MQ=255) tATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgc < 1:35524‑M2/101‑15 (MQ=255) gCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagt > 1:1703082‑M2/1‑83 (MQ=255) cTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctatcattaccgccagta < 2:367519‑M2/101‑20 (MQ=255) atatCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaac > 1:599996‑M2/1‑80 (MQ=255) atatCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaac < 1:124648‑M2/101‑22 (MQ=255) atatCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaac > 1:1464542‑M2/1‑80 (MQ=255) tatCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacg > 1:1517920‑M2/1‑79 (MQ=255) cgtcgGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccg < 2:121451‑M2/101‑26 (MQ=255) gtcgGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTTCTGgctgtcatttccgccagtaacgccgg > 1:1688513‑M2/1‑75 (MQ=255) gtcgGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccgg < 2:1051176‑M2/101‑27 (MQ=255) cgGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccgggg > 1:121451‑M2/1‑73 (MQ=255) ggTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggc < 1:316605‑M2/101‑30 (MQ=255) ttCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcac > 1:1632577‑M2/1‑70 (MQ=255) tCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcact > 2:441560‑M2/1‑69 (MQ=255) tCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcact > 1:1421581‑M2/1‑69 (MQ=255) gCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcgg > 1:424159‑M2/1‑66 (MQ=255) gCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcgg < 2:1657124‑M2/101‑36 (MQ=255) gCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcgg < 2:941588‑M2/101‑36 (MQ=255) aTGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaa < 2:348573‑M2/101‑39 (MQ=255) aaGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgac > 2:1082228‑M2/1‑56 (MQ=255) aGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgaca < 1:1521262‑M2/101‑47 (MQ=255) cGACTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaa > 1:578422‑M2/1‑51 (MQ=255) cTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacac < 2:1249305‑M2/101‑54 (MQ=255) cTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacac > 1:904400‑M2/1‑48 (MQ=255) cTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacac < 1:1622336‑M2/101‑54 (MQ=255) cTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacac < 1:741764‑M2/101‑54 (MQ=255) cTCACCGCCCTTGATACGGACGCCGAGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacac > 1:1700534‑M2/1‑48 (MQ=255) cACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccg > 1:1657130‑M2/1‑46 (MQ=255) cACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccg < 1:1690744‑M2/101‑56 (MQ=255) ccGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgcc < 1:1139181‑M2/101‑58 (MQ=255) cGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgcca < 1:165932‑M2/101‑59 (MQ=255) cTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggct < 1:715384‑M2/101‑63 (MQ=255) tGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgt > 1:179760‑M2/1‑37 (MQ=255) gATACGGACGCCGCGCAAAAAGCGCGGGGCGTACTGgctgtcattcccgccagtaacgccggggccctcggcaaaggcgacaaaaacaccgccaggctgtt > 2:741759‑M2/1‑36 (MQ=255) gATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgtt < 1:1232838‑M2/101‑66 (MQ=255) aTACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgtta > 1:348573‑M2/1‑35 (MQ=255) tACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttag > 2:1520939‑M2/1‑34 (MQ=255) cgccgcGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtc < 2:157400‑M2/101‑74 (MQ=255) cgccgcGCAAAAAGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtc > 2:1622330‑M2/1‑28 (MQ=255) aaaaaGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactatt > 1:379796‑M2/1‑20 (MQ=255) aaaaaGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactatc < 2:994608‑M2/101‑82 (MQ=255) aaaaGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattg > 1:284736‑M2/1‑19 (MQ=255) aaGGGCCGGGCGTACTGgctgtcattcccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggaggtcccactattgag > 1:597461‑M2/1‑17 (MQ=255) aGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagc > 1:431234‑M2/1‑16 (MQ=255) aGCGCCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagc > 2:1268842‑M2/1‑16 (MQ=255) gcgcCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagca > 1:722604‑M2/1‑15 (MQ=255) tgccGGGTGATCTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcac > 2:1378497‑M2/2‑14 (MQ=255) cgcCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcac > 1:859993‑M2/1‑14 (MQ=255) gcCGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcact < 2:1013141‑M2/101‑89 (MQ=255) ccGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcacta < 2:1197065‑M2/101‑90 (MQ=255) ccGGGCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcacta > 2:638142‑M2/1‑12 (MQ=255) gggCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactcttgagcactatc < 2:964914‑M2/101‑92 (MQ=255) gggCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatc < 1:411088‑M2/101‑92 (MQ=255) gCGTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatcat < 1:789381‑M2/101‑94 (MQ=255) gTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatcatca > 1:985482‑M2/1‑6 (MQ=255) gTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatcatca < 2:1055266‑M2/101‑96 (MQ=255) gTACTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatcatca < 1:585400‑M2/101‑96 (MQ=255) cTGgctgtcattaccgccagtaacgccggggcactcggcaaaggcgacaaaaacaccgccaggctgttaggcggtcccactattgagcactatcatcaggc > 1:1039233‑M2/1‑3 (MQ=255) | CCAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATGGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 40/32472‑32569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |