New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 146 | 1 = | 0 (0.000) | 33 (0.680) +GACTGGTATAACTCCAGC |
29/164 | 0.8 | 100% | intergenic (–/–) | –/– | –/– |
? | 160 | = 8899 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 160/8800‑8899 | tAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAg < 2:616261‑M2/101‑2 (MQ=255) aTGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgct < 1:411565‑M2/101‑4 (MQ=255) gCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctgga < 1:685912‑M2/101‑7 (MQ=255) aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt < 2:1456791‑M2/101‑10 (MQ=255) aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt < 1:260775‑M2/101‑10 (MQ=255) aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt < 2:1553386‑M2/101‑10 (MQ=255) tGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtta < 2:454624‑M2/101‑11 (MQ=255) tGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGAGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggggtta < 2:1084443‑M2/101‑11 (MQ=255) gTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttata < 2:500888‑M2/101‑13 (MQ=255) ttttAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttatac > 2:22287‑M2/1‑88 (MQ=255) ttttAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttatac < 1:971738‑M2/101‑14 (MQ=255) ccTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggc < 2:235945‑M2/101‑22 (MQ=255) cTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggca < 1:168714‑M2/101‑23 (MQ=255) tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcag > 2:389455‑M2/1‑78 (MQ=255) aGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattcc > 1:917162‑M2/1‑73 (MQ=255) aGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggaagattcc > 1:461434‑M2/1‑73 (MQ=255) tACTGCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggta > 2:1221172‑M2/1‑69 (MQ=255) ttCGGTAAAGAAGTGGGCTTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgt > 2:1225341‑M2/1‑66 (MQ=255) cGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcg < 1:218809‑M2/101‑38 (MQ=255) gTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggt < 2:160087‑M2/101‑40 (MQ=255) aagaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttg > 2:1408506‑M2/1‑59 (MQ=255) agaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgc > 1:1070298‑M2/1‑58 (MQ=255) agaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgc < 1:1672386‑M2/101‑44 (MQ=255) aagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctc < 1:1696847‑M2/101‑46 (MQ=255) cGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtca < 2:1257929‑M2/101‑57 (MQ=255) cGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatag < 2:888340‑M2/101‑60 (MQ=255) gTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcgg < 1:1616434‑M2/101‑61 (MQ=255) tACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggc > 1:1181311‑M2/1‑40 (MQ=255) gtgtCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgag < 1:447617‑M2/101‑65 (MQ=255) tGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcggg < 1:1572997‑M2/101‑70 (MQ=255) aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag < 1:646766‑M2/101‑76 (MQ=255) aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag > 1:167186‑M2/1‑26 (MQ=255) aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag > 2:411560‑M2/1‑26 (MQ=255) gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcggggggcaggc < 2:360228‑M2/101‑78 (MQ=255) gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggt > 2:685907‑M2/1‑24 (MQ=255) gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggt > 2:1528729‑M2/1‑24 (MQ=255) cccccAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaat > 2:938899‑M2/1‑18 (MQ=255) ggCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagt > 2:636208‑M2/1‑12 (MQ=255) gCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtc > 1:1243106‑M2/1‑11 (MQ=255) cGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcg > 1:946340‑M2/1‑10 (MQ=255) atgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgcccccggtcatcggcgaggcggggggcagggcgcaattccagtcgtcgaa < 2:572061‑M2/101‑97 (MQ=255) atgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgacgcgggcggcaggtcgccataccagtcgtagaa < 2:1096707‑M2/101‑97 (MQ=255) tgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcgtagaaa < 1:233315‑M2/101‑98 (MQ=255) agctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcgtagaaactt < 1:117741‑M2/101‑101 (MQ=255) | TAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 160/8800‑8899 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |