| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 113 | 14458 = | 41 (0.710) | 32 (0.530) | 21/200 | 2.7 | 61.0% | intergenic (–/–) | –/– | –/– |
| ? | 6 | = 60364 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 6/60266‑60364 | cGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtg > 1:1125218‑M2/1‑99 (MQ=255)cGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtg < 1:21754‑M2/101‑3 (MQ=255)cGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtg < 2:351987‑M2/101‑3 (MQ=255) aGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccgga < 2:1218525‑M2/101‑8 (MQ=255) gCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCGTCGTTCACCATtgccggat > 1:1666148‑M2/1‑93 (MQ=255) ccTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatg > 1:1530715‑M2/1‑92 (MQ=255) ccTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatg > 1:536367‑M2/1‑92 (MQ=255) ccTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatg < 1:1274898‑M2/101‑10 (MQ=255) cTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgc > 2:458866‑M2/1‑91 (MQ=255) atgatgatgTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgtt < 1:624562‑M2/101‑17 (MQ=255) atgatgTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaac < 2:736520‑M2/101‑20 (MQ=255) tgatgTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacg < 1:348916‑M2/101‑21 (MQ=255) gATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttat > 1:941320‑M2/1‑75 (MQ=255) ttGAAATGATGTAAAAGACAGATTGCCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatcc > 2:833416‑M2/1‑73 (MQ=255) ttGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatcc > 1:183217‑M2/1‑73 (MQ=255) tGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccg < 2:1411106‑M2/101‑30 (MQ=255) tGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccg < 1:1598277‑M2/101‑30 (MQ=255) gAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccgg < 2:311901‑M2/101‑31 (MQ=255) atgatgTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcct < 2:1087824‑M2/101‑34 (MQ=255) atgatgTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcct > 2:1499673‑M2/1‑68 (MQ=255) atgTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacg < 1:981291‑M2/101‑37 (MQ=255) atgTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacg < 2:823589‑M2/101‑37 (MQ=255) tgTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacgg < 2:25814‑M2/101‑38 (MQ=255) gTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggt < 2:1004907‑M2/101‑39 (MQ=255) gTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggt > 2:1451746‑M2/1‑63 (MQ=255) tAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggtt < 1:710098‑M2/101‑40 (MQ=255) aaGACAGATTACCTGGCCGGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCCCCATtgccggatgcggcgttaacgccttatccggcctacggttgag > 1:616983‑M2/1‑59 (MQ=255) aCAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggttgagcac > 2:1012815‑M2/1‑56 (MQ=255) aCAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggttgagcac < 1:1450680‑M2/101‑46 (MQ=255) cAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggttgagcact > 1:159980‑M2/1‑55 (MQ=255) cAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggttgagcact > 2:1274893‑M2/1‑55 (MQ=255) aGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCATtgccggatgcggcgttaacgccttatccggcctacggttgagcactc < 2:1354713‑M2/101‑48 (MQ=255) | CGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAAAAGACAGATTACCTGGCCTGATAAGACGCGTGAGCGTCGCATCAGGCATCGTTCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 6/60266‑60364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |