New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 111 = 963290 (1.260)32 (0.480) 22/200 3.1 41.6% intergenic (–/–) –/– –/–
?176 1 = 0 (0.000)intergenic (–/–) –/– –/–
Rejected: Coverage evenness skew score above cutoff.

‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATGTG  >  176/1‑101
  |                                                                                                    
caccATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtg    >  2:243939/3‑101 (MQ=255)
caccATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtg    >  2:584821/3‑101 (MQ=255)
  ccATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtgtg  <  1:1570437/101‑1 (MQ=255)
  ccATCCTCGTAGGCCTGATAAGCCTAGCGCATCAGCCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtgtg  <  2:222577/101‑1 (MQ=255)
  |                                                                                                    
‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATGTG  >  176/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.