| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 10 | 1 = | 0 (0.000) | 43 (0.730) | 31/200 | 0.9 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 103 | = 16246 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TTGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 103/16147‑16246 | ttGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAt > 1:44592‑M2/1‑100 (MQ=255)ttGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAt > 2:1380373‑M2/1‑100 (MQ=255) tCCACCGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggat > 1:989143‑M2/1‑93 (MQ=255) cACCGCCAGAATTTGTTCAAAAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgc > 1:23163‑M2/1‑91 (MQ=255) ccGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcgg > 1:520360‑M2/1‑89 (MQ=255) gttCATCGGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgcctt > 1:361057‑M2/1‑77 (MQ=255) tcatcaGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttat > 1:1266590‑M2/1‑75 (MQ=255) atcaGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatcc < 1:965241‑M2/101‑29 (MQ=255) caGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccgg < 1:255703‑M2/101‑31 (MQ=255) ggAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcc < 1:426387‑M2/101‑33 (MQ=255) ccATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctaca > 1:315533‑M2/1‑65 (MQ=255) aTAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaa < 1:1024658‑M2/101‑39 (MQ=255) aaaCAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaac < 2:1232147‑M2/101‑41 (MQ=255) aaaCAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaac > 1:142561‑M2/1‑61 (MQ=255) aCAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacag > 1:937063‑M2/1‑59 (MQ=255) aGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtg > 2:1675037‑M2/1‑57 (MQ=255) gAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgc > 1:1626081‑M2/1‑56 (MQ=255) aaaaCCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgca < 1:276273‑M2/101‑47 (MQ=255) aaCCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaa > 2:1634679‑M2/1‑53 (MQ=255) cgGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaat < 1:1308227‑M2/101‑55 (MQ=255) cgGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaat > 2:555004‑M2/1‑47 (MQ=255) cgGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaat > 2:576751‑M2/1‑47 (MQ=255) cgGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaat > 1:1603219‑M2/1‑47 (MQ=255) gggTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatat > 1:851249‑M2/1‑45 (MQ=255) gTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatat > 2:149787‑M2/1‑43 (MQ=255) tACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattg > 2:390820‑M2/1‑41 (MQ=255) tACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattg > 1:1053508‑M2/1‑41 (MQ=255) cccGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgca > 1:520904‑M2/1‑39 (MQ=255) cggcggTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaat > 1:413499‑M2/1‑37 (MQ=255) cggTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatctt > 2:1014172‑M2/1‑34 (MQ=255) ggTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttc > 2:1585721‑M2/1‑33 (MQ=255) gTGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttct < 1:1222085‑M2/101‑70 (MQ=255) tGCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctg < 1:1343575‑M2/101‑71 (MQ=255) gCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctgg > 2:679045‑M2/1‑30 (MQ=255) gCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctgg < 1:791451‑M2/101‑72 (MQ=255) gCAGATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctgg < 1:833843‑M2/101‑72 (MQ=255) gATTGTTGACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtag < 1:222621‑M2/101‑75 (MQ=255) ttgttgACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggc < 1:1210103‑M2/101‑77 (MQ=255) tgttgACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcc < 1:1052983‑M2/101‑78 (MQ=255) gttgACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcct > 1:1220816‑M2/1‑23 (MQ=255) tgACAACGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcctga < 1:399422‑M2/101‑81 (MQ=255) aaCGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataag < 1:1452093‑M2/101‑85 (MQ=255) aaCGTACGCATTGTTCAtgccggatgcggcgtaaacgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataag > 1:922031‑M2/1‑17 (MQ=255) | TTGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 103/16147‑16246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |