New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 36 | = 33227 | 0 (0.000) | 27 (0.500) +CACCACC |
14/186 | 1.7 | 73.4% | intergenic (–/–) | –/– | –/– |
? | 51 | 15533 = | 21 (0.470) | intergenic (–/–) | –/– | –/– |
ATCTCCTGGTGTTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 36/33129‑33227 | aTCTCCTGGTGTTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGca > 1:335247‑M1/1‑99 (MQ=255) tcCTGGTGTTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcacca > 1:1002119‑M1/1‑96 (MQ=255) ccTGGTGTTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccac > 1:386545‑M1/1‑95 (MQ=255) gtgtTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgcc > 1:1434044‑M1/1‑91 (MQ=255) tAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcgg < 1:980310‑M1/101‑19 (MQ=255) gtcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcga < 1:1285896‑M1/101‑24 (MQ=255) gtcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcga > 2:135613‑M1/1‑78 (MQ=255) gtcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcga > 1:397423‑M1/1‑78 (MQ=255) gtcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcga > 1:703775‑M1/1‑78 (MQ=255) tcATGGTTTCCCCTGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGGAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgag > 2:251297‑M1/1‑77 (MQ=255) tcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgag < 2:1023398‑M1/101‑25 (MQ=255) tcATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgag < 1:260388‑M1/101‑25 (MQ=255) aTGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgggag > 2:586777‑M1/1‑75 (MQ=255) ggTTTCCCCCGGCGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgcc > 1:1577836‑M1/1‑73 (MQ=255) cccccGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatc > 1:892681‑M1/1‑68 (MQ=255) ccccGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatcc > 2:154626‑M1/1‑67 (MQ=255) ccccGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatcc > 2:272852‑M1/1‑67 (MQ=255) ccccGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatcc > 2:1560101‑M1/1‑67 (MQ=255) cccGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccg < 1:585846‑M1/101‑36 (MQ=255) gtAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctac > 1:224477‑M1/1‑60 (MQ=255) gtAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctac > 2:632082‑M1/1‑60 (MQ=255) tAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCATCGcaccaccgccggatgcggcgcgagcgccttatccggcctacg < 2:787602‑M1/101‑43 (MQ=255) tAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacg > 2:11031‑M1/1‑59 (MQ=255) aaGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaa > 1:96728‑M1/1‑57 (MQ=255) gCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGccccaccgccggatgcggcgcgagcgccttatccggcctacgaatc < 1:283232‑M1/101‑47 (MQ=255) cGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaatcg > 1:1213838‑M1/1‑54 (MQ=255) tGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaatcggc < 1:319740‑M1/101‑50 (MQ=255) cTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaatcggcat < 1:348048‑M1/101‑52 (MQ=255) cTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaatcggcat < 1:1144157‑M1/101‑52 (MQ=255) cTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCGcaccaccgccggatgcggcgcgagcgccttatccggcctacgaatcggcat < 1:617435‑M1/101‑52 (MQ=255) | ATCTCCTGGTGTTGGTTAGTCGTCATGGTTTCCCCCGGTGTAAAGCGTGCTCCCAGTAGGCATGATAAGACGCGGTAAGCGTCGCATCAGGCTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 36/33129‑33227 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |