| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 36 | 1 = | 0 (0.000) | 69 (0.990) +TT |
37/196 | 1.2 | 68.8% | intergenic (–/–) | –/– | –/– |
| ? | 36 | = 96 | 64 (0.900) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGGCGCTGCGG > 36/1‑103 | gctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGt > 1:968646‑M1/96‑101 (MQ=255) ctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGtt < 2:474221‑M1/7‑1 (MQ=255) tgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTa > 1:508368‑M1/94‑101 (MQ=255) tgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTa > 2:118060‑M1/94‑101 (MQ=255) tgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTa < 1:151721‑M1/8‑1 (MQ=255) tgtcggatgcggcatgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCg > 2:896444‑M1/88‑101 (MQ=255) gccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCgg > 1:527688‑M1/87‑101 (MQ=255) gccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCgg < 1:134074‑M1/15‑1 (MQ=255) gccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCgg > 1:1655884‑M1/87‑101 (MQ=255) cggatgcggcatgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGAt > 2:1280244‑M1/85‑101 (MQ=255) gatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATgc > 2:141272‑M1/83‑101 (MQ=255) atgcggcgtgaacgccttatccgacctacacagcactgaactcgtagggctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATgcg < 2:1630472‑M1/20‑1 (MQ=255) tgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATgcgg < 1:803291‑M1/21‑1 (MQ=255) cggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGAtgcggca < 1:1461182‑M1/23‑2 (MQ=255) ggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGatgcggcat < 1:712653‑M1/24‑3 (MQ=255) gcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGgatgcggcatg > 1:879075‑M1/77‑98 (MQ=255) gtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATgaa > 1:918949‑M1/75‑100 (MQ=255) atgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAg < 2:140528‑M1/27‑1 (MQ=255) atgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAg < 1:791455‑M1/27‑1 (MQ=255) tgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCAtgaac > 2:366100‑M1/74‑99 (MQ=255) tgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAgc < 1:152003‑M1/28‑1 (MQ=255) tgaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAgc < 1:987534‑M1/28‑1 (MQ=255) gaacgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAgcg < 1:919754‑M1/29‑1 (MQ=255) aacgccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAacgc < 1:897454‑M1/30‑1 (MQ=255) acgccttatccgacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGcc > 2:241849‑M1/71‑101 (MQ=255) gccttatccgacctacacagcaccgaactcgtaggcctgataagaagcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAACGACtt < 2:505485‑M1/33‑1 (MQ=255) ccttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTa < 2:1187457‑M1/34‑1 (MQ=255) cttatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTAt < 2:1232529‑M1/35‑1 (MQ=255) tatccgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATcc < 1:241849‑M1/37‑1 (MQ=255) cgacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGAcc < 1:426328‑M1/41‑1 (MQ=255) gacctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCt > 2:1015222‑M1/60‑101 (MQ=255) gacctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCt < 1:164503‑M1/42‑1 (MQ=255) gcctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTa > 2:989714‑M1/59‑101 (MQ=255) cctacacagcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTac < 2:618853‑M1/44‑1 (MQ=255) cctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTac < 1:1503769‑M1/44‑1 (MQ=255) cctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTac > 1:52762‑M1/58‑101 (MQ=255) ctacacagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTaca < 2:765073‑M1/45‑1 (MQ=255) acagcaccgaactcgtaggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACctacacagc < 2:897182‑M1/49‑3 (MQ=255) agcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGacctacacagcac > 1:249764‑M1/51‑97 (MQ=255) gcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCgacctacacagcacc > 2:803286‑M1/50‑96 (MQ=255) gcactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCgacctacacagcacc > 2:352643‑M1/50‑96 (MQ=255) cactgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCcgacctacacagcaccg > 1:257591‑M1/49‑95 (MQ=255) actgaactcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATccgacctacacagcaccga < 1:230525‑M1/54‑8 (MQ=255) taggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAg > 2:1460990‑M1/38‑101 (MQ=255) taggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAg < 1:255339‑M1/64‑1 (MQ=255) aggcctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAgg < 1:378613‑M1/65‑1 (MQ=255) ctgataagacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTg > 2:1060541‑M1/33‑101 (MQ=255) aagacgcgcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGac < 2:691473‑M1/74‑1 (MQ=255) agacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGa > 2:328953‑M1/27‑101 (MQ=255) gacgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGac < 2:490337‑M1/76‑1 (MQ=255) acgcggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGaca > 1:1182713‑M1/25‑101 (MQ=255) cggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACacaa > 2:987529‑M1/22‑101 (MQ=255) cggcagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACacaa > 1:767281‑M1/22‑101 (MQ=255) gcaagcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCtgataagacgcggcag > 1:1253922‑M1/21‑94 (MQ=255) agcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGt < 2:797128‑M1/84‑1 (MQ=255) gcgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTc > 2:502575‑M1/17‑101 (MQ=255) cgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGt < 2:411065‑M1/86‑1 (MQ=255) cgtcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGACTGATAAGACACAACAGCGt < 1:266193‑M1/86‑1 (MQ=255) tcgcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCg > 1:349352‑M1/14‑101 (MQ=255) gcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCa < 2:574484‑M1/90‑1 (MQ=255) gcatcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCa < 1:1108532‑M1/90‑1 (MQ=255) gcatcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATc < 2:817828‑M1/90‑1 (MQ=255) catcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCAt < 1:1458322‑M1/91‑1 (MQ=255) catcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCa < 1:328953‑M1/91‑1 (MQ=255) catcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCa > 1:1232534‑M1/11‑101 (MQ=255) catcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCa < 2:767276‑M1/91‑1 (MQ=255) catcaggcaaTGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACA‑‑GCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCa > 1:720895‑M1/11‑101 (MQ=255) atcaggcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATc < 2:839883‑M1/92‑1 (MQ=255) tcaggcaatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAgg < 2:559204/93‑1 (MQ=18) aggcaatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgca < 2:712648/95‑2 (MQ=18) aggcaatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgca > 2:1450451/7‑100 (MQ=18) ggcaatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgcaa > 2:1239487/6‑99 (MQ=18) gcaaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGgcg > 1:321707‑M1/5‑101 (MQ=255) caatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgcaatg > 1:1060546/4‑97 (MQ=18) aatGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgcaatgc > 1:225306/3‑96 (MQ=18) aaTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGGCGCt < 2:266995‑M1/99‑1 (MQ=255) atGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgcaatgct > 1:739486/2‑95 (MQ=18) aTGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGGCGCTg > 2:1346906‑M1/2‑101 (MQ=255) tGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCT‑‑ACACAGCACCGAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGgcaatgctg < 1:446799/101‑8 (MQ=18) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCTGTTATTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACACACAGCACTGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGGCGCTGCGG > 36/1‑103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |