New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 25 | = 39928 | 0 (0.000) | 57 (0.880) +T |
45/198 | 0.3 | 50.9% | intergenic (–/–) | –/– | –/– |
? | 62 | 21299 = | 111 (1.480) | intergenic (–/–) | –/– | –/– |
TGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGA > 25/39828‑39931 | tgtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAggg > 2:1117729/1‑101 (MQ=255) tgtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAggg > 2:304201/1‑101 (MQ=255) gtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGt < 2:470368‑M1/101‑2 (MQ=255) gtgACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGt > 2:1607775‑M1/1‑100 (MQ=255) aCCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgac > 1:1037120‑M1/1‑97 (MQ=255) cacaAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacat > 1:540155‑M1/1‑95 (MQ=255) gTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgc > 2:34686‑M1/1‑90 (MQ=255) gTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgc > 2:1576216‑M1/1‑90 (MQ=255) tcttcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtat < 1:1158019‑M1/101‑17 (MQ=255) tcttcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtat < 2:993292‑M1/101‑17 (MQ=255) tcttcGCTTTTTCGTATGAAGATACTGTCATCAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtat < 1:1474851‑M1/101‑17 (MQ=255) cttcGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatg > 2:1035809‑M1/1‑84 (MQ=255) cTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggt < 2:1639891‑M1/101‑23 (MQ=255) ttttCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacccagtatggcggtag < 2:996438‑M1/101‑25 (MQ=255) tATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgt > 2:1687565‑M1/1‑71 (MQ=255) aTGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgtt < 1:1120052‑M1/101‑32 (MQ=255) aTGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgtt < 1:1375055‑M1/101‑32 (MQ=255) aTGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGagacatgacgcagtatggcggtagcattgtt > 2:1223462‑M1/1‑70 (MQ=255) tGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACTGGCGGCGCGTCAGGGggacatgacgcagtatggcggtagcattgtac > 1:212650‑M1/1‑69 (MQ=255) tGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttc > 1:1106882‑M1/1‑69 (MQ=255) tGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttc < 2:540150‑M1/101‑33 (MQ=255) gatctactgTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcag < 2:118003‑M1/97‑35 (MQ=255) aGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagg > 2:442819‑M1/1‑66 (MQ=255) aTACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggt > 1:780918‑M1/1‑64 (MQ=255) tACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggtt > 2:806085‑M1/1‑63 (MQ=255) aCTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttc > 1:1546298‑M1/1‑62 (MQ=255) aCTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagagatc > 1:118003‑M1/1‑62 (MQ=255) tGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcag > 2:1522633‑M1/1‑60 (MQ=255) aTTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccgg > 1:454265‑M1/1‑56 (MQ=255) tAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccgggg > 2:1605443‑M1/1‑54 (MQ=255) aaaaTAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggt < 2:395019‑M1/101‑49 (MQ=255) taataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgt > 2:1496754‑M1/1‑49 (MQ=255) ataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtat < 2:1287841‑M1/101‑55 (MQ=255) ataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGCCGCGGCAGGGtgacatgacgcaggatggcggtagcattgttcagggttcagccgggggacgtat > 1:819107‑M1/1‑47 (MQ=255) ataGAAAAGGATTTTACGATGAGCGGAAAACCGGCGACGCGTCAGGGtgacaagacgcagtatggcggtagcattgttcagggttcagccggggtacgtat > 1:163840‑M1/1‑47 (MQ=255) aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattg > 1:717917‑M1/1‑45 (MQ=255) aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattg < 2:1602531‑M1/101‑57 (MQ=255) aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattg > 2:271639‑M1/1‑45 (MQ=255) aGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattg > 2:1065595‑M1/1‑45 (MQ=255) aGAAAAGGATTGTACGATGAGCGGAAATCCGGCGGCGCGTCAGGGtgacatgactcagtatggcggtagcattgttcagggttcagccggggtacgtattg < 1:616624‑M1/101‑57 (MQ=255) aaaaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggt > 1:789832‑M1/1‑43 (MQ=255) aaaaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggt > 1:771664‑M1/1‑43 (MQ=255) aaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgc > 2:1597225‑M1/1‑41 (MQ=255) aaGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgc < 1:106477‑M1/101‑61 (MQ=255) aGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcc > 1:1529318‑M1/1‑40 (MQ=255) tttACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccac < 1:1117734‑M1/101‑67 (MQ=255) ttACGATGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccacc > 1:1410143‑M1/1‑34 (MQ=255) tGAGCGGAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcgggagcattgttcagggttcagccggggaacgtattggtgcccccaccggcgtg > 2:891283‑M1/1‑28 (MQ=255) ggAAAACCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctg > 2:236043‑M1/1‑23 (MQ=255) aaaaCCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgtt < 2:1228402‑M1/101‑81 (MQ=255) aaaCCGGCGGCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttc < 2:284112‑M1/101‑82 (MQ=255) cggcggCGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtg < 1:176795‑M1/101‑86 (MQ=255) ggcggcGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgt < 2:720875‑M1/101‑87 (MQ=255) ggcggcGCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgt > 1:696103‑M1/1‑15 (MQ=255) cggcgCGTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgc < 1:304201‑M1/101‑89 (MQ=255) cgcgTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgcccc < 2:356186‑M1/101‑92 (MQ=255) gcgTCAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgccccg < 2:1366098‑M1/101‑93 (MQ=255) cAGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgccccggcgg > 2:1183794‑M1/1‑5 (MQ=255) aGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgccccggcggg < 1:1607781‑M1/101‑98 (MQ=255) aGGGtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgccccggcggg < 2:1055425‑M1/101‑98 (MQ=255) gggtgacatgacgcagtatggcggtagcattgttcagggttcagccggggtacgtattggtgcccccaccggcgtggcctgttcggtgtgccccggcgggg < 2:652082‑M1/101‑99 (MQ=255) | TGTGACCACAAGTTTTTCTTCGCTTTTTCGTATGAAGATACTGTCATTAAAATAATAGAAAAGGATTTTACGATGAGCGGAAAACCGGCGGCGCGTCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGA > 25/39828‑39931 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |