| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 194 | = 5424 | 0 (0.000) | 43 (0.830) +AGCGCATCAGGCGATT |
35/168 | 0.6 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 54 | = 28773 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGCTCGTTGTTCATGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 194/5324‑5424 | gtgCTCGTTGTTCATGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGt > 2:805039/1‑101 (MQ=255) gCTCGTTGTTCATGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTag > 2:253637‑M1/1‑99 (MQ=255) cTCGTTGTTCATGTTGGATGCGGCATGAGCACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagc > 2:488971‑M1/1‑98 (MQ=255) gttCTTGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatca < 1:532735‑M1/101‑10 (MQ=255) ttCATGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcag < 1:597594‑M1/101‑11 (MQ=255) aTGTTGGATGCGGCATGAACCCCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcagcaggcg < 2:1229226‑M1/101‑14 (MQ=255) aTGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcg > 2:293837‑M1/1‑88 (MQ=255) aTGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcg > 2:1099827‑M1/1‑88 (MQ=255) tGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcga > 2:735889‑M1/1‑87 (MQ=255) tGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcga < 1:1279731‑M1/101‑15 (MQ=255) gTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgat > 2:1184652‑M1/1‑86 (MQ=255) ttGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatt < 2:1074766‑M1/101‑17 (MQ=255) ctgGACGCGGGATGAAAAACTTCTCAGGCCTACAAAATCTTGAAAATTCATTATATTCCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatt < 2:1166969‑M1/100‑17 (MQ=255) gATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgattttt > 2:268021‑M1/1‑82 (MQ=255) aTGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttc > 1:1395498‑M1/1‑81 (MQ=255) cATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttat < 2:667326‑M1/101‑27 (MQ=255) cATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttat < 2:751659‑M1/101‑27 (MQ=255) aTGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatg < 1:661123‑M1/101‑28 (MQ=255) aTGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatg > 1:639953‑M1/1‑74 (MQ=255) gAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcaacaggcgatttttcgtttatgat < 2:1512170‑M1/101‑30 (MQ=255) aaacCCCTTCTCAGGCCTACAAAACCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgat < 1:266587‑M1/100‑30 (MQ=255) acacCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatca < 1:1601972‑M1/101‑32 (MQ=255) cacCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcat < 2:991316‑M1/101‑33 (MQ=255) acCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatc > 1:1166610‑M1/1‑68 (MQ=255) cTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaa < 1:1099832‑M1/101‑36 (MQ=255) cTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaa > 2:428053‑M1/1‑66 (MQ=255) ttCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatccggcgatttttcgtttatgatcatcaag < 2:87605‑M1/101‑37 (MQ=255) ttCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaag < 1:1488145‑M1/101‑37 (MQ=255) ctcAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggc < 2:314510‑M1/101‑39 (MQ=255) cAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggctt > 1:365059‑M1/1‑61 (MQ=255) ggCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttcc < 1:543210‑M1/101‑43 (MQ=255) cTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttc > 2:1471928‑M1/1‑56 (MQ=255) aCAGAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgg > 2:12491‑M1/1‑54 (MQ=255) aaaTCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaa > 2:205792‑M1/1‑51 (MQ=255) cTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcct < 1:504351‑M1/101‑55 (MQ=255) aaTTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctac < 1:805044‑M1/101‑61 (MQ=255) aaTATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttat < 2:1322509‑M1/101‑66 (MQ=255) aaTATATTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttat < 2:869877‑M1/101‑66 (MQ=255) atatatTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatc < 1:268021‑M1/101‑67 (MQ=255) tatatTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcg > 1:1196062‑M1/1‑34 (MQ=255) tatatTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcg > 2:666992‑M1/1‑34 (MQ=255) atatTGCAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgc < 1:1683261‑M1/101‑69 (MQ=255) cAATCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatc > 1:996817‑M1/1‑27 (MQ=255) aaTCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatca > 1:30800‑M1/1‑26 (MQ=255) aaTCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatca > 2:545665‑M1/1‑26 (MQ=255) aaTCTCCGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatca < 1:345566‑M1/101‑76 (MQ=255) ccGTGTAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatct < 1:585731‑M1/101‑81 (MQ=255) tgtAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtc > 2:97965‑M1/1‑18 (MQ=255) gtAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcg < 1:1447394‑M1/101‑85 (MQ=255) gtAGGCCTGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcg > 1:29356‑M1/1‑17 (MQ=255) tGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgc > 2:1571263‑M1/1‑10 (MQ=255) tGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgc > 2:1427986‑M1/1‑10 (MQ=255) tGATAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgc > 2:1162515‑M1/1‑10 (MQ=255) aTAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgc > 1:1642033‑M1/1‑8 (MQ=255) tAAGCGTagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcc < 1:735894‑M1/101‑95 (MQ=255) tagcgcatcaggcgatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaaca < 2:1339751‑M1/101‑101 (MQ=255) | GTGCTCGTTGTTCATGTTGGATGCGGCATGAACACCTTCTCAGGCCTACAAAATCTTGCAAATTCAATATATTGCAATCTCCGTGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 194/5324‑5424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |