| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 180 | = 7195 | 0 (0.000) | 62 (1.100) +AGCG |
53/192 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 84 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGCTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 180/7097‑7195 | gtgCTTTGTTCATGCCGGATGCGGGGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTag < 2:324008‑M1/101‑3 (MQ=255) cTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgc > 2:859392‑M1/1‑96 (MQ=255) tttGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgca > 1:1220409‑M1/1‑95 (MQ=255) tttGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgca > 2:84397‑M1/1‑95 (MQ=255) ttGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcat < 1:117314‑M1/101‑8 (MQ=255) ttGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcat > 2:484598‑M1/1‑94 (MQ=255) tGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatc > 1:722906‑M1/1‑93 (MQ=255) gTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatca < 2:1690415‑M1/101‑10 (MQ=255) ttCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcag > 2:1274151‑M1/1‑91 (MQ=255) tCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcagg < 2:224468‑M1/101‑12 (MQ=255) cATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggc > 1:807158‑M1/1‑89 (MQ=255) aTGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggca < 2:748939‑M1/101‑14 (MQ=255) aTGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggca < 2:1285397‑M1/101‑14 (MQ=255) aTGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggca < 1:1633606‑M1/101‑14 (MQ=255) gCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaat < 1:1547653‑M1/101‑16 (MQ=255) ccGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaatt < 1:799338‑M1/101‑17 (MQ=255) ggcgTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttt > 1:1194743‑M1/1‑77 (MQ=255) gcgtaaccctTTGTCCCGCCAAAAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgtttta < 2:831887‑M1/97‑27 (MQ=255) cgTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgtttta > 2:970876‑M1/1‑75 (MQ=255) gTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaa > 1:642933‑M1/1‑74 (MQ=255) gTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaa > 1:1604768‑M1/1‑74 (MQ=255) cTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttc < 2:591967‑M1/101‑35 (MQ=255) tGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttc < 1:321067‑M1/101‑38 (MQ=255) tCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATACCGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttctt < 1:25940‑M1/101‑40 (MQ=255) tCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttctt < 2:958020‑M1/101‑40 (MQ=255) cGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgt < 2:994881‑M1/101‑42 (MQ=255) cGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgt < 1:1554463‑M1/101‑42 (MQ=255) ccAACACAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttca > 2:884870‑M1/1‑57 (MQ=255) ccAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttca < 2:403334‑M1/101‑45 (MQ=255) ccAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttca > 1:1068062‑M1/1‑57 (MQ=255) ccAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttca > 1:1204300‑M1/1‑57 (MQ=255) aacaaAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatc > 1:1064541‑M1/1‑55 (MQ=255) aacaaAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatc < 1:1667699‑M1/101‑47 (MQ=255) acaaAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatca > 1:605606‑M1/1‑54 (MQ=255) acaaAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatca < 2:1270458‑M1/101‑48 (MQ=255) aGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgct > 2:1279706‑M1/1‑49 (MQ=255) agtAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagggcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttca < 2:1543569‑M1/100‑57 (MQ=255) gTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcag < 2:173029‑M1/101‑58 (MQ=255) tAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcagg > 1:1600458‑M1/1‑43 (MQ=255) aaaTTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggt > 1:1195346‑M1/1‑42 (MQ=255) aaTTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtc > 1:861235‑M1/1‑41 (MQ=255) aaTTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtc < 1:84397‑M1/101‑61 (MQ=255) aTTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtca < 1:311313‑M1/101‑62 (MQ=255) cAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcg < 2:782242‑M1/101‑65 (MQ=255) cAATATATTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcg > 2:863438‑M1/1‑37 (MQ=255) atatatTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaa > 1:450328‑M1/1‑35 (MQ=255) tatTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgg < 2:240582‑M1/101‑70 (MQ=255) atTGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatggg > 1:739811‑M1/1‑31 (MQ=255) tGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgagtgggtg > 2:169358‑M1/1‑29 (MQ=255) tGCTGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggtt < 2:1065107‑M1/101‑73 (MQ=255) tGAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgta > 1:384590‑M1/1‑26 (MQ=255) gAAATAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtac < 1:1553828‑M1/101‑77 (MQ=255) aaaTAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtact > 2:1234407‑M1/1‑24 (MQ=255) aaTAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtactt > 1:456255‑M1/1‑23 (MQ=255) aTAACGTAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttc < 1:292226‑M1/101‑80 (MQ=255) tAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttca > 2:864129‑M1/1‑16 (MQ=255) tAGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttca > 1:667131‑M1/1‑16 (MQ=255) aGGCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcac < 1:859397‑M1/101‑87 (MQ=255) ggCCTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcacc < 2:807153‑M1/101‑88 (MQ=255) ccTGATAAGCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcaccga > 1:1543670‑M1/1‑12 (MQ=255) gCGTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcaccgacatctttc < 2:642928‑M1/101‑98 (MQ=255) gTagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcaccgacatctttctg < 2:1220404‑M1/101‑100 (MQ=255) tagcgcatcaggcaattttacgttttaatcacttcttcttgttcatcatcgctttcaggtcagcgaatgggttgtacttcgcttcaccgacatctttctgc < 1:1077130‑M1/101‑101 (MQ=255) | GTGCTTTGTTCATGCCGGATGCGGCGTAAACGCTTTGTCCGGCCAACAAAAGCACGTAAATTCAATATATTGCTGAAATAACGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 180/7097‑7195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |