| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 150 | 3637 = | 23 (0.380) | 38 (0.770) +GGCGTAAACGCCTTATCCGGCCTAC |
29/150 | 0.7 | 81.5% | intergenic (–/–) | –/– | –/– |
| ? | 27 | = 39041 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACA > 150/3537‑3736 | tCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGagag < 1:406966/101‑1 (MQ=255) ctatgacgtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCa < 2:98148‑M1/3‑1 (MQ=255) tgacgtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATcc > 1:446759‑M1/96‑101 (MQ=255) aGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGGCCTGTATTTCGCTGTAGTGATGAGAGGATcc > 1:289638/1‑101 (MQ=255) acgtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCgg > 2:298185‑M1/94‑101 (MQ=255) acgtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCgg < 1:1679740‑M1/8‑1 (MQ=255) cgtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGc < 2:1004028‑M1/9‑1 (MQ=255) gtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCa < 2:89722‑M1/10‑1 (MQ=255) gtatctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCa < 2:703472‑M1/10‑1 (MQ=255) ggTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAAt < 2:6840/101‑1 (MQ=255) tctggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAatt > 1:1595595‑M1/89‑100 (MQ=255) gTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGGGAAGGGGGGGCCTGTATTTCGCTGTAGGGATGAGAGCATCCGGCAAtg > 1:418616/1‑100 (MQ=255) tggcaaaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGcaattgg < 1:281561‑M1/15‑4 (MQ=255) aaaCCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCACTGTAGTGATGAGAGCAACCgggcatatg > 1:1065020/1‑94 (MQ=255) aCCCGCGTGGATTGGGGCGTTATCGCGAGTTGAAGAGACGCTGGCGGGAGAAGCGGGGACCCGTGTTTAGCTGCAGTGATTAGAGGATCGCGCAACCtgtg > 1:1103583/1‑101 (MQ=255) cgcgTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGGAGCGGGGACCTGGATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCAc > 2:552512/1‑101 (MQ=255) aaccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCAc < 1:550090‑M1/20‑1 (MQ=255) gcgTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGGCCTGGATTTTGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCAcc > 2:1282726/1‑101 (MQ=255) ccatgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGcacga < 2:551496‑M1/22‑3 (MQ=255) catgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTgcacgat > 2:494309‑M1/79‑98 (MQ=255) atgcccgatgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATg < 2:829849‑M1/24‑1 (MQ=255) gcccgatgcgacgctgtcgcgtcttatcgtgactacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGcc > 1:1371026‑M1/76‑101 (MQ=255) aTTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCt < 2:1651587/101‑1 (MQ=255) tGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGTGAAGCGGGGGCCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAAACGGTGCACCATGCCTGa > 2:1010860/1‑101 (MQ=255) atgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATg < 2:775879‑M1/31‑1 (MQ=255) atgcgacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATg > 2:716730‑M1/71‑101 (MQ=255) ggCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGc < 2:923292/101‑1 (MQ=255) cGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGa < 1:1323544/101‑1 (MQ=255) gacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGAc < 2:846846‑M1/35‑1 (MQ=255) gacgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGAc > 1:402552‑M1/67‑101 (MQ=255) gTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGGCCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGGGGACCCTGCCTGCTGCGAc > 2:590572/1‑101 (MQ=255) gTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGGCCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAAACGGTGCACCATGCCTGATGCgcc > 1:877482/1‑99 (MQ=255) acgctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACg > 1:1441705‑M1/66‑101 (MQ=255) gctgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCt > 1:525914‑M1/64‑101 (MQ=255) tCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCtt < 2:241735/101‑1 (MQ=255) tgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACgctgg > 1:401935‑M1/62‑99 (MQ=255) tgtcgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACgctgg > 2:840296‑M1/62‑99 (MQ=255) cgcgAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTg > 1:1255192/1‑101 (MQ=255) gcgAATTGAAGAGACGCTGGCGGGCGGAGCGGGGACCTGTATTTCGCTGTAGTGGTGAGAGAATCCGGCAATCGGGGGCCCAAGCCCGATTTGACGCCTgg > 2:139323/1‑100 (MQ=255) cgcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCgacgctggcgc < 2:1306279‑M1/43‑6 (MQ=255) gcgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGcgacgctggcgcg < 1:654041‑M1/44‑7 (MQ=255) cgtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATgcgacgctggcgcgt < 2:743243‑M1/45‑8 (MQ=255) aTTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGAcgcg > 1:71772/1‑101 (MQ=255) ttGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGt < 1:613723/101‑1 (MQ=255) gtcttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCT‑GGCGCGTc < 2:923826‑M1/46‑1 (MQ=255) ttatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTa > 2:356518‑M1/53‑101 (MQ=255) aaGAGACGCTGGCGGGCGAAGCGGGGGCCTGGATTTCGCTGTAGTGATGAGAGGATCCGGCAATCGGTGCACCATGCCTGATGCGACGCCTGACGCGTCtt > 2:648207/1‑101 (MQ=38) tatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTAt < 2:1476143‑M1/50‑1 (MQ=255) tatcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTAt > 1:349750‑M1/52‑101 (MQ=255) atcgtgcctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATc < 1:755890‑M1/51‑1 (MQ=255) gaCGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCa < 1:1160021/101‑1 (MQ=255) gccgacaaatactccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCT‑GGCGCGTCTTATCAGGcc > 2:70843‑M1/46‑101 (MQ=255) cctacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCt < 1:1652314‑M1/57‑1 (MQ=255) tacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCTAc > 1:342984‑M1/43‑101 (MQ=255) tacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCTAc > 1:98148‑M1/43‑101 (MQ=255) tacaaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCTAc > 1:1297477‑M1/43‑101 (MQ=255) ggcgggcgAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTa < 2:209145/101‑1 (MQ=255) cgggcgAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa < 2:657362/101‑1 (MQ=255) aaatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCTacatt < 2:599209‑M1/62‑3 (MQ=255) ggCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAt < 2:289638‑M1/101‑2 (MQ=255) aatagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGCCtacattg < 2:1135683‑M1/63‑4 (MQ=255) tagtccgaaccgtaggccggataaggcgtttacgccGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGG‑CGCGTCTTATCAGGcctacattggt < 2:1324109‑M1/65‑6 (MQ=255) cGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGAGGCGACGCTTCACGCGTCTTATCAGGCCGACAAtgg > 2:385874‑M1/1‑98 (MQ=255) aaGCGGGGACCTGTATTTCGCTGTAGTGATGAGCGCATCCGGCAATCGGTGCACCACGCCTGATGCGACGCGTGACGCGTCTTATCAGGCCTACACtgggt > 1:126482‑M1/1‑96 (MQ=255) aGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggta > 1:43599‑M1/1‑95 (MQ=255) gggACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccgg > 2:971194‑M1/1‑91 (MQ=255) aCCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagc < 2:1001304‑M1/101‑14 (MQ=255) cTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcgg < 2:363507‑M1/101‑16 (MQ=255) cTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcgg > 2:79622‑M1/1‑86 (MQ=255) cTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcgg > 1:993349‑M1/1‑86 (MQ=255) gTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggta > 1:1020440‑M1/1‑84 (MQ=255) gTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggta > 1:1448957‑M1/1‑84 (MQ=255) gTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggta > 1:1316968‑M1/1‑84 (MQ=255) gTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggta < 2:1489208‑M1/101‑18 (MQ=255) aTTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaag > 1:1345684‑M1/1‑82 (MQ=255) tCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccg > 1:1125006‑M1/1‑79 (MQ=255) cGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccgg > 1:286888‑M1/1‑78 (MQ=255) tAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataag < 2:542012‑M1/101‑29 (MQ=255) tAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataag < 1:1349847‑M1/101‑29 (MQ=255) aGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataagg > 2:760945‑M1/1‑72 (MQ=255) gTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggc < 1:969059‑M1/101‑31 (MQ=255) atgaGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtt < 1:1359584‑M1/101‑34 (MQ=255) agagCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtttac < 1:1626028‑M1/101‑37 (MQ=255) agagCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtttac < 2:1259813‑M1/101‑37 (MQ=255) gagCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtttacg < 1:1251355‑M1/101‑38 (MQ=255) gagCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtttacg < 1:892215‑M1/101‑38 (MQ=255) agCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAtgggtaccggagcggtaagccggataaggcgtttacgc > 2:1234010‑M1/1‑63 (MQ=255) | TCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTGATGAGAGCATCCGGCAATCGGTGCACCATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACA > 150/3537‑3736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |