| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 147 | 1 = | 0 (0.000) | 34 (0.530) | 19/184 | 3.2 | 56.2% | intergenic (–/–) | –/– | –/– |
| ? | 91 | = 8417 | 53 (0.940) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
‑‑‑‑‑‑‑‑‑‑ATCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGT > 147/1‑99 | ttcacgccgcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAg < 1:371931/91‑1 (MQ=255) cgccgcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTg > 2:1642734/7‑101 (MQ=255) ccgcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCg > 1:1253255/5‑101 (MQ=255) cgcaTCCGGCATGAATAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCgg > 2:1260738/4‑101 (MQ=255) cgcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCgg < 2:1026899/98‑1 (MQ=255) cgcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCgg > 2:685172/4‑101 (MQ=255) gcaTCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGgt > 1:880667/3‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑ATCCGGCATGAACAAAGAGCACTTCATCAGCAATCTGAAACTCAACTAAACAGCCCAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGT > 147/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |