New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 104 | = 16231 | 0 (0.000) | 17 (0.360) | 7/180 | 3.1 | 100% | intergenic (–/–) | –/– | –/– |
? | 15 | = 49030 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
Rejected: Coverage evenness skew score above cutoff. |
AAGAACCAAAGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑ > 104/16133‑16231 | aagaaCCAAAGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtg > 1:1275665/1‑99 (MQ=255) aaCCAAAGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtgaac < 1:968570/101‑6 (MQ=255) aaCCAAAGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtgaac < 2:513467/101‑6 (MQ=255) aaaGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtgaacgcct > 1:1404593/1‑92 (MQ=255) aaGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtgaacgcctt < 1:1193626/101‑11 (MQ=255) aaGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATgcggcgtgaacgcctt < 1:789244/101‑11 (MQ=255) | AAGAACCAAAGCAGTGACATTTGTCTGATGCCGCACGTAGGCCTGATAAGACGCGGACAGCGTCGCATCAGGCATCTTGTGCAAATGTCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑ > 104/16133‑16231 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |