New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 96 | 17075 = | 46 (0.800) | 27 (0.680) +TGCAGATGCCTGATGCGACGCTTGCGCGTCT |
15/138 | 2.2 | 63.0% | intergenic (–/–) | –/– | –/– |
? | 96 | = 17144 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CCATCCGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCAGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 96/17121‑17075 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCAGGCCTACAAATTCTCGCGCCATCCGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCAGTCGTGCTGGGATGGG < 96/17144‑17065 ||||||||||||||||||||||||||||||| cgaaatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCG < 2:834939/95‑1 gaaatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGC > 1:339031/6‑101 gaaatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGC > 1:732073/6‑101 atGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCAT > 2:1321356/3‑101 GCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAG < 1:1168615/101‑1 GCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAG < 1:309663/101‑1 CCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGG < 2:453222/101‑1 GGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCC < 1:717434/101‑1 GGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCC < 2:12399/101‑1 gatAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCG < 1:100830/98‑1 atAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGG > 1:887251/3‑101 tAAGGCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGA < 1:1350362/100‑1 aggCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGAta > 2:860909/4‑99 ggCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAA < 1:33537/99‑1 gCGTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAG < 2:1699221/100‑1 GTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGACTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGgc > 2:1701086/1‑99 GTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGgc < 2:331520/101‑3 GTTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGgc > 2:1506447/1‑99 TTCACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCG > 2:92248/1‑101 CACGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTT < 1:1708749/101‑1 CGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTta < 2:144271/101‑3 CGCCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTta < 2:490900/101‑3 CCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACG > 2:135578/1‑101 CGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGC < 1:1425388/101‑1 CATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCG > 2:344611/1‑101 GGCAGTCGTGTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCC > 1:1530004/1‑101 GTGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGT > 1:1223864/1‑101 ATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGTGCgcag < 1:36991/101‑5 ATGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGTGCgcag > 2:1606175/1‑97 GCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGTGCgcagat < 2:769438/101‑7 GCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGTGCgcagat < 2:1223859/101‑7 TGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCGCCATCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCGTGCgcagatgcc > 1:822680/1‑92 ||||||||||||||||||||||||||||||| CCATCCGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCAGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 96/17121‑17075 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCAGGCCTACAAATTCTCGCGCCATCCGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCAGTCGTGCTGGGATGGG < 96/17144‑17065 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |