| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 4 | = 78067 | 0 (0.000) | 20 (0.250) | 16/194 | 3.2 | 29.8% | intergenic (–/–) | –/– | –/– |
| ? | 65 | 7293 = | 94 (0.930) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 4/77967‑78067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 65/7293‑7391 nCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC > 1:840977/2‑101CCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC < 2:454367/101‑1 GCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGG < 2:980743/101‑1 GCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGG < 1:948564/101‑1 GCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGG > 1:318736/1‑101 ACACCGCGCACTATGAAGTGGTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGAT < 2:207004/101‑1 ACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGC < 2:1210656/101‑1 CACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTA < 1:159583/101‑1 ACTATGAAGTTCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAA < 2:654300/101‑1 ACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAA > 1:1188666/1‑101 ACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAA > 2:421017/1‑101 CTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAA > 1:728773/1‑101 TATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAAC < 1:1387799/101‑1 TATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAAC < 1:1153983/101‑1 AGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTT < 1:1090549/101‑1 TGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCG > 1:607917/1‑101 CTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA < 2:1067464/101‑1 TGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAC < 2:1371521/101‑1 TGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAaa > 2:1066981/1‑99 AAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGT > 2:390913/1‑101 AAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGT < 2:969952/101‑1 AAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGGGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACAAGCGTgcaaattc > 2:704947/1‑93 GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC < 2:381458/101‑1 CCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 4/77967‑78067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGGATGCGGCGTAAACGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 65/7293‑7391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |