| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 38 | = 21181 | 53 (0.870) | 36 (1.240) +GGTTTTCATCGTTG |
24/172 | 0.2 | 50.2% | intergenic (–/–) | –/– | –/– |
| ? | 92 | = 39 | 30 (4.530) | intergenic (–/–) | –/– | –/– | |||||
TGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 38/21086‑21181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATT‑‑‑‑‑‑‑‑‑ < 92/39‑1 |||||||||||||| TGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTT < 1:1145922/101‑1TGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTT < 1:1324121/101‑1 GCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGCTTTC > 1:933668/1‑101 CAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCA < 2:63832/101‑1 AGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCAT > 1:538263/1‑101 GTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATC < 2:993128/101‑1 GTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATC > 2:1006263/1‑101 GTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATC < 2:500208/101‑1 GTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGT > 1:86941/1‑101 GTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGT < 2:125347/101‑1 TCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTT < 2:1590519/101‑1 TGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGT < 1:1006268/101‑1 GTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAG > 2:404661/1‑101 GTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAG < 2:152726/101‑1 GTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGC > 1:634572/1‑101 TGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCC > 2:1519498/1‑101 ATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTG > 2:660175/1‑101 CGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACG < 2:671099/101‑1 GGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGC > 2:1253262/1‑101 GGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCG < 1:45120/101‑1 CTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGC > 2:919964/1‑101 GCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAG < 2:1283269/101‑1 GCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAG < 2:728123/101‑1 CGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGTCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGC < 1:811919/101‑1 CTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGT > 2:152229/1‑101 TGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTC > 1:384258/1‑101 TGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTC > 1:1064045/1‑101 GTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCG > 2:889315/1‑101 TGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCA > 2:1047891/1‑101 GTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCAT < 1:799587/101‑1 GTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCAT > 1:166862/1‑101 GTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCAT > 1:2498/1‑101 TCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA > 2:65560/1‑101 TCTGATTTGAGGAAAAACATGTCGGATGCGGCGTAACCGCCTTATCCGCCCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 1:1304619/101‑1 TGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG < 1:1253267/101‑1 TTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT < 1:1613822/101‑1 TTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT < 2:1045996/101‑1 TGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTa < 2:400956/101‑2 TGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTa < 2:796426/101‑2 GAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTac > 2:1259159/1‑99 AGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTaca > 1:1698070/1‑98 AGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGAAGCGGCAAGCGTCGCATCAGGCATTaca > 1:1544385/1‑98 GGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTacaag < 1:660180/101‑6 GGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTacaag < 2:1206610/101‑6 GAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTacaagg > 1:1068439/1‑95 AAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTacaaggg < 2:106969/101‑8 AACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTTTCATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTacaaggggc > 2:1353253/1‑92 |||||||||||||| TGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 38/21086‑21181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATT‑‑‑‑‑‑‑‑‑ < 92/39‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |