| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 32 | 1 = | 0 (0.000) | 38 (0.620) +AGGTCGGCAATAGT |
25/172 | 2.2 | 53.8% | intergenic (–/–) | –/– | –/– |
| ? | 58 | = 16379 | 76 (1.070) | intergenic (–/–) | –/– | –/– | |||||
AGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 32/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTAT < 58/16379‑16311 |||||||||||||| AGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAG < 2:328552/101‑1 CGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGT < 2:297470/101‑1 CGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGT > 2:1683251/1‑101 GGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCA < 2:371814/101‑1 CTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAAT > 2:1408198/1‑101 TGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATA > 2:542658/1‑101 AGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTT > 1:1186918/1‑101 GAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTG < 1:37876/101‑1 AGCGTGCGGGCTTATGAGAAAGCGATTTTGAGGCAGAGTGGGTAAACACTGGCGGTTGCGGCGCGAGCTCCTTATCCGGCCTACAGGTCGGAAATAGTTGT < 2:265538/101‑1 GCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTA < 2:609519/101‑1 CGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAG < 2:1641577/101‑1 CGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAG > 1:223575/1‑101 gtaCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGG < 1:653981/98‑1 CGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCT > 2:1640651/1‑101 GGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTG > 2:897479/1‑101 GGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTG < 2:115283/101‑1 GCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGAT > 2:562622/1‑101 TGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGAC < 2:1427046/101‑1 TGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGAC < 1:851452/101‑1 TGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGAC < 2:206499/101‑1 GAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCG > 2:1050969/1‑101 AAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGAC < 2:606508/101‑1 AAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGAC > 1:1264742/1‑101 AAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGAC < 1:562627/101‑1 AAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGAC < 1:832695/101‑1 GCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACag < 2:94664/101‑3 CAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGG > 1:341593/1‑101 GCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCA < 2:1540934/101‑1 TGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATtg < 1:824239/101‑3 GTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATtgatt > 2:784388/1‑96 CACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGG > 1:1006088/1‑101 CACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGG > 2:1419794/1‑101 GCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGC > 2:1428332/1‑101 CCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCG > 2:242185/1‑101 GGATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGC > 2:978017/1‑101 GATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCa < 2:593487/101‑2 GATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCa < 2:1347376/101‑2 ATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCac > 1:84699/1‑99 ATGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCac < 1:1419800/101‑3 TGCGGCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCacg < 1:784393/101‑4 GCGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCacgagtg < 1:1025900/101‑8 CGCGAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCacgagtgc < 1:955808/101‑9 GAGCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCGCGAGTGCCTT > 2:1198031/1‑101 GCGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACGAGTGCCTTAT > 2:575217/1‑101 |||||||||||||| AGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGCGATTTTGAGCCAGCGTGGGTAAACACTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 32/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGACGCGACCGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTAT < 58/16379‑16311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |