New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	222	= 1443	0 (0.000)	76 (0.050)	62/200	0.0	98.7%	intergenic (–/–)	–/–	–/–
	?	52	= 27920	2 (0.030)					intergenic (–/–)	–/–	–/–

GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1347‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAAT  <  52/27920‑27821                                                                                                                                                                                                       GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTC                                                                                                  >  1:442976/1‑101   ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGG                                                                                                >  2:120423/1‑101    TTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGG                                                                                               <  1:734836/101‑1     TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGG                                                                                              >  2:1644307/1‑101      AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGC                                                                                             >  1:1113778/1‑101      AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGC                                                                                             >  2:1450358/1‑101        CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCT                                                                                           >  2:785031/1‑101        CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCT                                                                                           >  2:549187/1‑101         CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTT                                                                                          >  2:1517131/1‑101               TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTT                                                                                    >  2:461186/1‑101                TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTT                                                                                   >  1:1123937/1‑101                  AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCT                                                                                 <  1:1379420/101‑1                   AAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTG                                                                                <  2:486583/101‑1                    AGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGA                                                                               >  1:114542/1‑101                     GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGAT                                                                              <  1:782077/101‑1                     GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGAT                                                                              <  1:1454595/101‑1                      GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATT                                                                             >  2:392762/1‑101                       TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTC                                                                            >  2:156932/1‑101                        CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCC                                                                           >  1:871766/1‑101                         TGACTCCAATTGAATATCGGAATCAGACTTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCC                                                                          <  1:385833/101‑1                          GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCG                                                                         <  2:617139/101‑1                           ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGG                                                                        <  2:1204533/101‑1                               CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAG                                                                    <  1:1252919/101‑1                               CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAG                                                                    <  2:680392/101‑1                                 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCC                                                                  >  1:435837/1‑101                                   TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCTGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTG                                                                <  2:746460/101‑1                                     AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAA                                                              <  2:264807/101‑1                                      ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAA                                                             >  1:1700116/1‑101                                        ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAAC                                                           >  2:292276/1‑101                                             AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAA                                                      >  2:1295967/1‑101                                              ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAG                                                     >  1:801522/1‑101                                                CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC                                                   >  1:394803/1‑101                                                CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC                                                   >  2:195395/1‑101                                                 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCT                                                  <  2:123725/101‑1                                                    CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAG                                               >  1:560297/1‑101                                                    CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAG                                               <  2:635773/101‑1                                                     CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGG                                              <  2:1042861/101‑1                                                     CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGG                                              >  1:326662/1‑101                                                      TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGC                                             <  2:620010/101‑1                                                       ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCA                                            >  1:459710/1‑101                                                           GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCG                                        >  1:417039/1‑101                                                            CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGC                                       >  1:1049530/1‑101                                                                  GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCAT                                 >  1:897474/1‑101                                                                  GTTTAACTGTCCAACTTTTTGGGGCCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCAT                                 >  1:1117814/1‑101                                                                    TTAACTGTCCAACTTTTTGGGGTCTGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCC                               <  1:387757/101‑1                                                                        CTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATG                           >  2:721399/1‑101                                                                         TGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGA                          >  2:507121/1‑101                                                                          GTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAG                         <  1:991895/101‑1                                                                          GTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAG                         >  1:140230/1‑101                                                                            CCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGT                       >  2:7784/1‑101                                                                            CCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGT                       >  2:157688/1‑101                                                                             CAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTT                      <  1:688068/101‑1                                                                             CAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTT                      >  2:1703779/1‑101                                                                              AACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTT                     <  2:442971/101‑1                                                                              AACTTTTGGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTT                     <  1:1482566/101‑1                                                                               ACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTC                    <  1:1450364/101‑1                                                                                 TTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCT                  >  2:265867/1‑101                                                                                  TTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTT                 <  1:1134921/101‑1                                                                                    TTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAG               <  2:1593529/101‑1                                                                                    TTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAG               <  2:326662/101‑1                                                                                     TGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGG              <  2:1444334/101‑1                                                                                     TGGGGTCAGGACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGG              <  2:306667/101‑1                                                                                      GGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGG             <  2:1123932/101‑1                                                                                      GGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGG             <  1:237572/101‑1                                                                                       GGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGA            >  1:286190/1‑101                                                                                        GGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAC           <  1:182209/101‑1                                                                                           CAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAA        <  1:1163051/101‑1                                                                                            AGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAA       >  1:117321/1‑101                                                                                            AGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAA       >  2:204077/1‑101                                                                                            AGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAA       >  2:296240/1‑101                                                                                             GTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAA      >  2:1515623/1‑101                                                                                              TACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAAT     <  1:195395/101‑1                                                                                               ACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATA    <  2:1564927/101‑1                                                                                                 AGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAAT  <  1:1312302/101‑1                                                                                                 AGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAAT  >  1:899362/1‑101                                                                                                 AGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAAT  <  1:296240/101‑1                                                                                                                                                                                                       GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1347‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAAT  <  52/27920‑27821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.