| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 145 | = 10378 | 0 (0.000) | 21 (0.500) +GGCGTGAACGCCTTATCCGACCTACGGTTCGG |
14/136 | 2.8 | 72.0% | intergenic (–/–) | –/– | –/– |
| ? | 190 | = 235 | 24 (0.390) | intergenic (–/–) | –/– | –/– | |||||
GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 145/10280‑10378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACC < 190/235‑181 |||||||||||||||||||||||||||||||| GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGG > 1:7702/1‑101GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGG < 1:207403/101‑1 GCGGGCCGGCTCTTATGTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGCCGGGTTTAAACGTCCCATCAGGCGCTGTTTGTCGGATGCGGCG < 2:1322742/101‑1 CGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGT > 1:1325342/1‑101 GGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTG < 2:1622747/101‑1 GGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTG > 2:1606724/1‑101 CCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAAC > 1:323182/1‑101 CCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAAC < 1:184044/101‑1 CGGCTCTTATCTCGAAGAGGTTGATGGGGGGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCCGACGCGGCGGGAACG > 2:813653/1‑101 CGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGAGTAAAAGTCGCGTCAGCCGCTGTTTGTCGGATGCGGCGTGAACG > 2:638796/1‑101 GGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGC > 2:1178490/1‑101 GCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCC > 1:1331027/1‑101 CTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATTGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCT > 2:1372837/1‑101 TCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTT > 2:614050/1‑101 CTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTA > 1:920618/1‑101 TATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATC > 1:176768/1‑101 ATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCC > 1:179888/1‑101 ATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGGAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCC > 1:1416123/1‑101 TCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCG < 2:1098481/101‑1 CTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGA > 2:361162/1‑101 GAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 1:418506/1‑101 AAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTA > 1:595794/1‑101 AAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTA > 1:1217275/1‑101 GAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACG > 2:488674/1‑101 ATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTC > 2:1533968/1‑101 TGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCG < 1:112039/101‑1 TGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCG < 1:79999/101‑1 GACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGC < 1:279358/101‑1 GGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTC > 2:726715/1‑101 GGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCG > 2:902025/1‑101 GGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCG > 2:1461799/1‑101 TGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCA > 2:24721/1‑101 GTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCAT > 2:1153305/1‑101 TAAACGTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATC < 1:510285/101‑1 GTCGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCA > 1:1443765/1‑101 CGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTCCGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAAT < 1:1710441/101‑1 CGCATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAAT < 1:1071827/101‑1 CATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGA > 2:1396926/1‑101 CATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGA < 1:875809/101‑1 ATCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAA > 2:1548513/1‑101 TCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAAT < 2:996348/101‑1 TCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAAT < 1:24721/101‑1 TCAGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAAT < 1:446573/101‑1 AGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGC > 1:79452/1‑101 AGGCGCTGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGC > 1:1644218/1‑101 TGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACC < 2:449383/101‑1 TGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACC < 2:99320/101‑1 TGTTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACC < 2:439713/101‑1 |||||||||||||||||||||||||||||||| GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 145/10280‑10378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACC < 190/235‑181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |