| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 115 | = 9626 | 77 (1.130) | 30 (0.440) | 21/200 | 3.1 | 43.8% | intergenic (–/–) | –/– | –/– |
| ? | 17 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAAGCGTCGCATCAGGCATC‑GTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 115/9562‑9626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTTGGTCA > 17/1‑99 tAAGCGTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCA < 1:135613/100‑1tAAGCGTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCA < 2:1433979/100‑1 AAGCGTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCAT > 1:1659724/1‑101 AAGCGTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCAT < 2:77754/101‑1 GCGTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATAT < 1:154626/101‑1 GTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTT < 2:159069/101‑1 GTCGCATCAGGCTTCAGCGCACC‑ACCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTT < 1:24461/101‑1 gcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACT < 1:272852/91‑1 cgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTC > 2:36614/10‑101 accaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTC < 1:391571/95‑1 accaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTC < 1:82231/95‑1 accaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTC > 1:380859/7‑101 ccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCT < 2:1275755/96‑1 GCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGC < 2:79439/101‑1 GCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGC > 2:1001871/1‑101 GATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTA < 1:451887/101‑1 GATGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTA < 1:294352/101‑1 TGCGGCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATC < 1:1686859/101‑1 GCGCGAGCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGC < 2:1577830/101‑1 gagCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGAT > 2:1189382/4‑101 agCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACACCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATA < 2:1076603/99‑1 gCGCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAA < 2:1002114/100‑1 GCCTTATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAG < 1:632087/101‑1 CCTTATCCGGCCTACGAAGCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGG < 2:107246/101‑1 ATCCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGG < 2:363122/101‑1 CCGGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGAT < 1:733275/101‑1 aGCCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTT < 2:335247/100‑1 CCTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTTGG < 2:1659718/101‑1 CTACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTTGGT > 2:728827/1‑101 ACGAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTTGGTCA < 2:886888/101‑1 CAAGCGTCGCATCAGGCATC‑GTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 115/9562‑9626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCGGCATCAGGCATAGCAACCCTCAATACCCCATATTTTTCTTCTTCTCTAACTCTTCTTTTGCGGTATCAGGCAGATAAAGGGTGGATTTGGTCA > 17/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |