Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	16975	18001	1027	76 [0]	[1] 64	[nhaA]	[nhaA]

CGACAATCATCGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTTGATAGTAAAATATCACTCGGGGCTTTTCTCTATCTGCCGTTCAGCTAATGCCTGAGACAGATAGCCTCAAGCACCCGCCGCTATTATATCGCTCTCT  >  REL606/16874‑17072                                                                                                     |                                                                                                   cGACAATCATCGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGt                                                                                                    >  1:811378/1‑101 (MQ=255)   aCAATCATCGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtg                                                                                                  <  1:555666‑M1/101‑3 (MQ=255)   aCAATCATCGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtg                                                                                                  <  2:796892‑M1/101‑3 (MQ=255)       tcatcGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtact                                                                                              <  1:1607421‑M1/101‑7 (MQ=255)         atcGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactga                                                                                            <  2:1237287‑M1/101‑9 (MQ=255)          tcGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgac                                                                                           <  1:1091463‑M1/101‑10 (MQ=255)           cGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgacc                                                                                          >  2:1332967‑M1/1‑91 (MQ=255)                  tgctgcTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaa                                                                                   >  2:711096‑M1/1‑84 (MQ=255)                   gctgctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaag                                                                                  <  2:1590726‑M1/101‑19 (MQ=255)                   gctgctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaag                                                                                  <  1:1194159‑M1/101‑19 (MQ=255)                   gctgctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaag                                                                                  <  2:1698239‑M1/101‑19 (MQ=255)                      gctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttg                                                                               >  2:589701‑M1/1‑80 (MQ=255)                       ctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttgg                                                                              >  2:600210‑M1/1‑79 (MQ=255)                       ctTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttgg                                                                              <  1:186185‑M1/101‑23 (MQ=255)                        ttCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttgga                                                                             >  1:979429‑M1/1‑78 (MQ=255)                         tCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggac                                                                            >  1:1583008‑M1/1‑77 (MQ=255)                          cATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggaca                                                                           <  1:1574234‑M1/101‑26 (MQ=255)                             tGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtt                                                                        >  2:882737‑M1/1‑73 (MQ=255)                              gCTCTCTTCTCCTTGACCTTACGGTCAGTAAGATGCACTCTACATGTGTTCAGCATATAGGGGTCCTCGGGTtgtactgtccccaaaaagttggagcgtta                                                                       <  2:1706054‑M1/101‑30 (MQ=255)                              gCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                                                                       >  1:184456‑M1/1‑72 (MQ=255)                              gCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                                                                       <  2:646633‑M1/101‑30 (MQ=255)                               ctctctTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                                                                      <  1:235494‑M1/101‑31 (MQ=255)                               ctctctTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                                                                      >  2:498703‑M1/1‑71 (MQ=255)                                 ctctTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                                                                    <  2:1583002‑M1/101‑33 (MQ=255)                                 ctctTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                                                                    <  1:1236068‑M1/101‑33 (MQ=255)                                    ttctCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacg                                                                 <  1:8211‑M1/101‑36 (MQ=255)                                      ctcCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgag                                                               <  2:979424‑M1/101‑38 (MQ=255)                                      ctcCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgag                                                               <  1:1675460‑M1/101‑38 (MQ=255)                                       tcCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgagg                                                              <  2:315918‑M1/101‑39 (MQ=255)                                        ccTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggc                                                             >  1:28151‑M1/1‑62 (MQ=255)                                         cTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggca                                                            <  1:600215‑M1/101‑41 (MQ=255)                                         cTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggca                                                            <  1:184444‑M1/101‑41 (MQ=255)                                          ttGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGGCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcat                                                           <  2:1112776‑M1/101‑42 (MQ=255)                                          ttGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcat                                                           >  2:1600888‑M1/1‑60 (MQ=255)                                           tGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcata                                                          <  2:1162057‑M1/101‑43 (MQ=255)                                           tGACCTTACGGTCAATAAGGGCCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcata                                                          <  2:1070204‑M1/101‑43 (MQ=255)                                              ccTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag                                                       >  2:216746‑M1/1‑56 (MQ=255)                                              ccTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag                                                       <  1:668825‑M1/101‑46 (MQ=255)                                               cTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg                                                      >  2:1252394‑M1/1‑55 (MQ=255)                                               cTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg                                                      >  1:1234232‑M1/1‑55 (MQ=255)                                                ttACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt                                                     >  1:879720‑M1/1‑54 (MQ=255)                                                    gggcagtAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggactataggtctga                                                 >  2:131679‑M1/4‑50 (MQ=255)                                                     gTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgat                                                <  1:775774‑M1/101‑53 (MQ=255)                                                        aGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc                                             >  2:1343956‑M1/1‑46 (MQ=255)                                                         gTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccg                                            <  1:1010236‑M1/101‑57 (MQ=255)                                                           aaGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgat                                          >  1:232354‑M1/1‑43 (MQ=255)                                                             gatctactctaCATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatat                                        <  2:610739‑M1/96‑61 (MQ=255)                                                              agGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt                                       >  2:1118926‑M1/1‑40 (MQ=255)                                                                  aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaat                                   <  1:1435760‑M1/101‑66 (MQ=255)                                                                  aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaat                                   >  2:559256‑M1/1‑36 (MQ=255)                                                                  aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatagatc                                   >  1:610744‑M1/1‑36 (MQ=255)                                                                   ctctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaatt                                  <  1:684019‑M1/101‑67 (MQ=255)                                                                    tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg                                 >  1:237453‑M1/1‑34 (MQ=255)                                                                    tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg                                 >  2:485537‑M1/1‑34 (MQ=255)                                                                    tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg                                 >  1:1190931‑M1/1‑34 (MQ=255)                                                                         aTGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtc                            >  2:1545954‑M1/1‑29 (MQ=255)                                                                             gtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagac                        <  1:1522531‑M1/101‑77 (MQ=255)                                                                                cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctt                     >  2:1342006‑M1/1‑22 (MQ=255)                                                                                cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctt                     >  1:775055‑M1/1‑22 (MQ=255)                                                                                 aGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttt                    >  1:956986‑M1/1‑21 (MQ=255)                                                                                 aGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttt                    >  1:923175‑M1/1‑21 (MQ=255)                                                                                  gCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttt                   <  1:1252399‑M1/101‑82 (MQ=255)                                                                                   cATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttta                  <  2:28151‑M1/101‑83 (MQ=255)                                                                                    atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaa                 >  2:392543‑M1/1‑18 (MQ=255)                                                                                     tataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaat                <  1:53883‑M1/101‑85 (MQ=255)                                                                                         gggggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttca            <  2:292858‑M1/101‑89 (MQ=255)                                                                                          ggggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcag           <  1:1433116‑M1/101‑90 (MQ=255)                                                                                           gggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcagg          <  2:471788‑M1/101‑91 (MQ=255)                                                                                           gggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcagg          <  2:1590917‑M1/101‑91 (MQ=255)                                                                                             gCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggct        <  1:1044759‑M1/101‑93 (MQ=255)                                                                                                tCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaat     <  1:1332973‑M1/101‑96 (MQ=255)                                                                                                 cGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt    <  1:401306‑M1/101‑97 (MQ=255)                                                                                                   ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct  >  2:1342928‑M1/1‑3 (MQ=255)                                                                                                   ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct  <  2:385612‑M1/101‑99 (MQ=255)                                                                                                   ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct  >  1:504109‑M1/1‑3 (MQ=255)                                                                                                   ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct  >  1:672616‑M1/1‑3 (MQ=255)                                                                                                     |                                                                                                   CGACAATCATCGCCTTATGCTGCTTCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTTGATAGTAAAATATCACTCGGGGCTTTTCTCTATCTGCCGTTCAGCTAATGCCTGAGACAGATAGCCTCAAGCACCCGCCGCTATTATATCGCTCTCT  >  REL606/16874‑17072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑