New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2655704 | 0 (0.000) | 85 (1.330) | 67/198 | 0.0 | 100% | intergenic (‑123/+7) | clpB/yfiH | protein disaggregation chaperone/hypothetical protein |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
AGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAA > REL606/2655604‑2655798 | aGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTc > 1:695328/1‑101 (MQ=255) gTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt < 1:1522857‑M1/101‑2 (MQ=255) gTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt < 1:786076‑M1/101‑2 (MQ=255) tGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgt < 2:342195‑M1/101‑4 (MQ=255) gCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgta < 1:228278‑M1/101‑5 (MQ=255) cTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtac > 2:1637379‑M1/1‑96 (MQ=255) cTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtac > 1:12972‑M1/1‑96 (MQ=255) cTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtac < 2:113291‑M1/101‑6 (MQ=255) aCTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactg < 1:809058‑M1/101‑8 (MQ=255) aCTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactg > 1:1186784‑M1/1‑94 (MQ=255) tGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgca > 1:908522‑M1/1‑92 (MQ=255) gaTTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcaccca > 2:1062889‑M1/1‑88 (MQ=255) gaTTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcaccca > 1:854301‑M1/1‑88 (MQ=255) aTTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccat > 2:68100‑M1/1‑87 (MQ=255) tAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattt > 1:282008‑M1/1‑85 (MQ=255) aaaTGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccatttt > 1:874486‑M1/1‑84 (MQ=255) gAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttg < 2:1167118‑M1/101‑22 (MQ=255) aGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttgg < 2:291740‑M1/101‑23 (MQ=255) gTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggac < 2:1605914‑M1/101‑25 (MQ=255) tCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatg > 1:1677878‑M1/1‑73 (MQ=255) ccTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaa < 1:1078966‑M1/101‑31 (MQ=255) ccTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaa < 1:653203‑M1/101‑31 (MQ=255) ccTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaa > 2:1455054‑M1/1‑71 (MQ=255) cTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaa < 2:687309‑M1/101‑32 (MQ=255) aaTTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatgg > 2:835702‑M1/1‑67 (MQ=255) aaTTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatgg > 2:760389‑M1/1‑67 (MQ=255) aaTTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatgg > 2:629641‑M1/1‑67 (MQ=255) attattCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatgga > 2:350472‑M1/1‑66 (MQ=255) ttattCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgttctgcacccattttgttggacgatgaaatggaa < 2:1479636‑M1/101‑37 (MQ=255) ttattCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaa < 1:116665‑M1/101‑37 (MQ=255) tattCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaat < 1:959878‑M1/101‑38 (MQ=255) attCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaata > 1:66594‑M1/1‑63 (MQ=255) attCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaata < 2:12972‑M1/101‑39 (MQ=255) attCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaata < 1:350472‑M1/101‑39 (MQ=255) ttCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatag < 2:1644732‑M1/101‑40 (MQ=255) ggTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:367738‑M1/1‑57 (MQ=255) gTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta < 2:854296‑M1/101‑46 (MQ=255) gTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:1460684‑M1/101‑46 (MQ=255) gTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:811270‑M1/101‑46 (MQ=255) tATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 2:116551‑M1/101‑48 (MQ=255) tATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:959298‑M1/101‑48 (MQ=255) ttGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 2:908517‑M1/101‑50 (MQ=255) ttGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 2:1113557‑M1/101‑50 (MQ=255) gACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt > 2:853441‑M1/1‑50 (MQ=255) gACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt > 2:1068182‑M1/1‑50 (MQ=255) aCCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc < 1:865755‑M1/101‑53 (MQ=255) aCCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc > 2:90429‑M1/1‑49 (MQ=255) ccAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 1:560513‑M1/101‑54 (MQ=255) ccAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 2:785565‑M1/1‑48 (MQ=255) ccAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:149257‑M1/101‑54 (MQ=255) cAGATTAATGTGAAAAGAAAATCACGCGTACCGGAACGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:285081‑M1/1‑47 (MQ=255) aGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa < 2:1141811‑M1/101‑56 (MQ=255) aaTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgaactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa > 2:411259‑M1/1‑41 (MQ=255) aTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa > 1:1589412‑M1/1‑40 (MQ=255) aTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa < 2:265572‑M1/101‑62 (MQ=255) tgtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa < 2:1078549‑M1/101‑63 (MQ=255) gtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 1:808933‑M1/1‑38 (MQ=255) gtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 2:71994‑M1/1‑38 (MQ=255) gtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat < 1:285081‑M1/101‑64 (MQ=255) gtgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat < 2:1012493‑M1/101‑64 (MQ=255) tgAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata > 2:1241760‑M1/1‑37 (MQ=255) gaaaagaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac > 1:1583701‑M1/1‑36 (MQ=255) gaaaagaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 1:1478922‑M1/101‑66 (MQ=255) aagaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct > 2:1668962‑M1/1‑33 (MQ=255) aagaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct < 2:1155845‑M1/101‑69 (MQ=255) agaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 2:256888‑M1/101‑70 (MQ=255) gaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt < 1:1637385‑M1/101‑71 (MQ=255) gaaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt < 1:898343‑M1/101‑71 (MQ=255) aaaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt < 2:1219552‑M1/101‑72 (MQ=255) aaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg < 2:333096‑M1/101‑73 (MQ=255) aaaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:960126‑M1/1‑29 (MQ=255) aaTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaaaggaatagcccctaatatgtcaaagccaaaatacccttttga > 1:179214‑M1/1‑28 (MQ=255) aTCACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa > 2:1228830‑M1/1‑27 (MQ=255) cACGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa > 2:505064‑M1/1‑25 (MQ=255) aCGCGTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag < 2:464083‑M1/101‑78 (MQ=255) cgcgTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcctctaatatgtcaaagccaaaatacccttttgaaaagc < 1:540442‑M1/101‑79 (MQ=255) gTACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc > 1:1507344‑M1/1‑20 (MQ=255) tACCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct < 2:282008‑M1/101‑83 (MQ=255) aCCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 1:795908‑M1/1‑18 (MQ=255) aCCGGATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 1:1473180‑M1/1‑18 (MQ=255) ggATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa > 1:974905‑M1/1‑15 (MQ=255) gATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 1:814241‑M1/1‑14 (MQ=255) gATCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag < 2:1443656‑M1/101‑88 (MQ=255) aTCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt > 1:1307876‑M1/1‑13 (MQ=255) aTCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt > 1:1616454‑M1/1‑13 (MQ=255) tCGTCTTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 1:1455060‑M1/101‑90 (MQ=255) ttGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa < 2:1322803‑M1/101‑95 (MQ=255) ttGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa > 1:1568921‑M1/1‑7 (MQ=255) | AGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAA > REL606/2655604‑2655798 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |