| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,196,656 | IS150 (–) +3 bp | coding (1350‑1352/1992 nt) | cirA ← | ferric iron‑catecholate outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 71 (1.110) | 60/198 | 0.1 | 94.5% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 2196658 | 4 (0.060) | coding (1350/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter | |||||
| * | ? | REL606 | 2196656 = | 4 (0.060) | 84 (1.310) | 58/200 | 0.1 | 95.3% | coding (1352/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666033‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAA < REL606/2196658‑2196559 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAC > 1:959352/1‑101AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAC > 2:158379/1‑101AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAC < 2:516407/101‑1AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAAC < 2:345030/101‑1 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCA > 2:1078483/1‑101 TTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGC < 1:1143378/101‑1 GCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAA > 1:789913/1‑101 CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAA > 1:336698/1‑101 CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAG > 1:1321954/1‑101 TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGT < 1:840787/101‑1 TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGT > 1:256238/1‑101 TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGT > 1:282400/1‑101 AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTG < 1:276880/101‑1 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGG < 1:1192542/101‑1 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGG > 2:1308914/1‑101 ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGG < 2:531347/101‑1 ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGG < 2:1693101/101‑1 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGA < 2:789908/101‑1 TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAG > 1:1411387/1‑101 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCT < 1:1072958/101‑1 GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGG < 1:341820/101‑1 GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGG < 2:1463459/101‑1 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TT < 2:1206667/101‑1 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TT > 1:1656405/1‑101 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTT < 1:1601268/101‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTT > 1:414747/1‑101 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTA < 1:411442/101‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTA < 1:950626/101‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTAC < 2:1321948/101‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTAC > 1:593687/1‑101 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTA > 2:1303329/1‑101 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTAC < 1:1225512/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACA > 1:1521276/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACAT > 2:508263/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACAT < 2:1422354/101‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGATGGGGC‑TTTACTACAT < 2:1155986/101‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGG > 2:604565/1‑101 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGT < 1:1093278/101‑1 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGT < 1:114827/101‑1 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAA < 2:1447525/101‑1 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAA < 2:1660230/101‑1 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGC > 1:755953/1‑101 TCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCT < 2:1328075/101‑1 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTG > 2:224882/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGG < 2:175522/101‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGG > 1:1158704/1‑101 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGC < 1:432468/101‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTG < 1:351030/101‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGG < 1:1078488/101‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGG < 2:704855/101‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGTCTGGA < 1:1014048/101‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAG < 2:178359/101‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGG < 1:963893/101‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGG > 1:1124391/1‑101 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTT > 2:1145304/1‑101 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATC > 2:971622/1‑101 TAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAG < 1:12411/101‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGGGAAGAAGGCTGGCTGGAAGGGGTGGAATCCAG > 1:482983/1‑101 CTGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGT > 2:1179828/1‑101 TGTCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGCTTTTTCTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGT < 1:158379/101‑1 TCCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTAC < 2:179156/101‑1 CCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACC > 1:1194570/1‑101 CCAACTTTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACC < 2:282400/101‑1 TTTTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTC < 1:1293503/101‑1 TTGGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCG < 1:519143/101‑1 GGGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTA > 2:1072152/1‑101 GGGTCAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAA < 2:1239610/101‑1 CAGTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGAT < 2:267298/101‑1 GTACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGT > 2:422841/1‑101 TACAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTG < 1:1179833/101‑1 CAAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAA < 2:282254/101‑1 AAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAA < 2:1305703/101‑1 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666033‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAACCAGCGAAAGTTGGGAGCTGGGGC‑TTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAA < REL606/2196658‑2196559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |