| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | REL606 | 3,684,366 | C→A | 100% | R216S (CGT→AGT) | ECB_03438 → | conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 3,684,366 | 0 | C | A | 100.0% | 396.3 / NA | 113 | R216S (CGT→AGT) | ECB_03438 | conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (63/50); total (63/50) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 113 total aligned reads displayed.
ACTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGCGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCGGG > REL606/3684318‑3684413 | aCTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgt > 1:10022838/1‑51 (MQ=255)aCTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgt < 1:2575655/51‑1 (MQ=255)aCTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgt > 1:4193812/1‑51 (MQ=255)aCTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgt < 1:4631988/51‑1 (MQ=255) cTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtg > 1:7441728/1‑51 (MQ=255) tGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtgg > 1:2509138/1‑51 (MQ=255) gAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggt > 1:5769185/1‑51 (MQ=255) gAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggt > 1:2326478/1‑51 (MQ=255) gAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggt > 1:6734160/1‑51 (MQ=255) gAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggt > 1:3318208/1‑51 (MQ=255) aaGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggtg > 1:4967872/1‑51 (MQ=255) gagCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgcg > 1:7650639/1‑51 (MQ=255) gagCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgcg > 1:9029223/1‑51 (MQ=255) agCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgcgc < 1:5052788/51‑1 (MQ=255) agCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgcgc < 1:7486127/51‑1 (MQ=255) gCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCa > 1:7680616/1‑51 (MQ=255) gCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCa < 1:8642655/51‑1 (MQ=255) gCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCa > 1:1406398/1‑51 (MQ=255) ccGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCaa > 1:5195985/1‑51 (MQ=255) ccGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCaa > 1:4415060/1‑51 (MQ=255) cgcgCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggtg < 1:10742335/45‑1 (MQ=255) cgcgCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAgtggt < 1:10417137/44‑1 (MQ=255) cgcgCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgc < 1:8082911/46‑1 (MQ=255) cgcgCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTgc < 1:4524136/46‑1 (MQ=255) cgcgCTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAAc > 1:4321448/1‑51 (MQ=255) gcgcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAAcc > 1:9841943/1‑51 (MQ=255) gcgcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAAcc < 1:4657676/51‑1 (MQ=255) gcgcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAAcc > 1:5988254/1‑51 (MQ=255) cgcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCg > 1:4662497/1‑51 (MQ=255) gcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGc > 1:5490/1‑51 (MQ=255) gcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGc > 1:8663601/1‑51 (MQ=255) gcTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGc > 1:3182075/1‑51 (MQ=255) cTACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCa < 1:4769457/51‑1 (MQ=255) tACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCAc > 1:1962488/1‑51 (MQ=255) tACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCAc > 1:4823765/1‑51 (MQ=255) tACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCAc > 1:5654245/1‑51 (MQ=255) tACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCAc > 1:665723/1‑51 (MQ=255) tACCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCAc > 1:7411239/1‑51 (MQ=255) aCCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACt > 1:347797/1‑51 (MQ=255) aCCTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACt > 1:3869315/1‑51 (MQ=255) cTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTAt < 1:6235125/51‑1 (MQ=255) cTGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTAt < 1:5017084/51‑1 (MQ=255) tGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTAtt < 1:3765743/51‑1 (MQ=255) tGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTAtt > 1:7722861/1‑51 (MQ=255) tGGCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTAtt < 1:4690899/51‑1 (MQ=255) ggCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTa < 1:4352963/51‑1 (MQ=255) ggCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTa < 1:8654363/51‑1 (MQ=255) ggCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTa > 1:6229280/1‑51 (MQ=255) ggCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTa > 1:3823840/1‑51 (MQ=255) ggCGCTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTa < 1:521381/51‑1 (MQ=255) gcgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTAc < 1:6841752/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCTCACTATTACg < 1:5024383/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:1868821/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:10833143/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:6911968/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:9267492/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:8340708/51‑1 (MQ=255) cgcTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACg < 1:1936854/51‑1 (MQ=255) cTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGAc > 1:665472/1‑51 (MQ=255) cTGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGAc < 1:8192617/51‑1 (MQ=255) tGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGAcc > 1:6308743/1‑51 (MQ=255) tGACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGAcc < 1:7324903/51‑1 (MQ=255) gACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCa > 1:6208241/1‑51 (MQ=255) gACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCa < 1:435686/51‑1 (MQ=255) gACGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCa > 1:2212751/1‑51 (MQ=255) aCGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCaa < 1:9246970/51‑1 (MQ=255) aCGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCaa < 1:211692/51‑1 (MQ=255) cGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAg < 1:2171688/51‑1 (MQ=255) cGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAg < 1:6934808/51‑1 (MQ=255) cGAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAg > 1:1929677/1‑51 (MQ=255) gAACTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGa > 1:8100903/1‑51 (MQ=255) aaCTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGaa > 1:7908401/1‑51 (MQ=255) aCTATTTTGTCGAACAGAGTGGTGCGCAACCGCCCTATTACGACCAAGAat > 1:8822054/1‑51 (MQ=255) aCTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAat < 1:5247957/51‑1 (MQ=255) aCTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAat > 1:8559889/1‑51 (MQ=255) cTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAata > 1:1047879/1‑51 (MQ=255) cTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAata > 1:26901/1‑51 (MQ=255) cTATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAata < 1:2349517/51‑1 (MQ=255) tATTTTGTTGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat < 1:4578621/51‑1 (MQ=255) tATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat < 1:2069183/51‑1 (MQ=255) tATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat > 1:7647819/1‑51 (MQ=255) tATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat > 1:9704251/1‑51 (MQ=255) tATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat > 1:525515/1‑51 (MQ=255) tATTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAatat < 1:4403494/51‑1 (MQ=255) aTTTTGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATg < 1:10208946/51‑1 (MQ=255) ttttGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGa > 1:3800943/1‑51 (MQ=255) ttGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGaaa < 1:4077315/51‑1 (MQ=255) tGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGaaaa > 1:9235080/1‑51 (MQ=255) tGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGaaaa < 1:8565470/51‑1 (MQ=255) tGTCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGaaaa < 1:9058416/51‑1 (MQ=255) tCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAgc < 1:1103212/51‑1 (MQ=255) tCGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAgc > 1:7078060/1‑51 (MQ=255) cGAACAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAgcg > 1:1939244/1‑51 (MQ=255) gAACAGAGTGGTGTGCAACCGCACTATTACGACCAAGAATATGAAAAgcgc > 1:1805237/1‑51 (MQ=255) aaCAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGcgcg < 1:2170652/51‑1 (MQ=255) aaCAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGcgcg < 1:5589974/51‑1 (MQ=255) aCAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCgg > 1:6288098/1‑51 (MQ=255) cAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCggg > 1:698012/1‑51 (MQ=255) cAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCggg > 1:7535641/1‑51 (MQ=255) cAGAGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCggg > 1:8540643/1‑51 (MQ=255) | ACTGAAGAGCCGCGCTACCTGGCGCTGACGAACTATTTTGTCGAACAGCGTGGTGCGCAACCGCACTATTACGACCAAGAATATGAAAAGCGCGGG > REL606/3684318‑3684413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |