BRESEQ :: Evidence

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	4047676	4049579	1904	136 [0]	[0] 152	[yihR]–[yihS]	[yihR],[yihS]

Only 100 of 136 total aligned reads displayed.

TTTTCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCCAGTAATAATAAGTCGATACCTGAATTAAAGGCGTTAGGCGGGCAAC  >  REL606/4047625‑4047722

ttttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTc                                                 <  1:3263420/51‑1 (MQ=255)

ttttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTc                                                 >  1:3516067/1‑51 (MQ=255)

ttttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTc                                                 >  1:2191248/1‑51 (MQ=255)

   tctcTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgt                                              <  1:7263487‑M2/51‑4 (MQ=255)

   tctcTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgt                                              >  1:1848988‑M2/1‑48 (MQ=255)

    ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta                                             <  1:6177042‑M2/51‑5 (MQ=255)

    ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta                                             >  1:1632131‑M2/1‑47 (MQ=255)

    ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta                                             >  1:908885‑M2/1‑47 (MQ=255)

     tctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtac                                            <  1:8333489‑M2/51‑6 (MQ=255)

     tctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtac                                            <  1:6624362‑M2/51‑6 (MQ=255)

      ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact                                           <  1:4078279‑M2/51‑7 (MQ=255)

      ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact                                           >  1:5026368‑M2/1‑45 (MQ=255)

      ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact                                           >  1:4478603‑M2/1‑45 (MQ=255)

      ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact                                           <  1:4458489‑M2/51‑7 (MQ=255)

       tGTCCGTAAATATTAAAAAACAGGCGGTGCAGTTTTCCTGATTCtgtactg                                          <  1:7619719‑M2/51‑8 (MQ=255)

        gTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgc                                         <  1:3506959‑M2/51‑9 (MQ=255)

        gTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgc                                         >  1:739914‑M2/1‑43 (MQ=255)

        gTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgc                                         <  1:10463332‑M2/51‑9 (MQ=255)

         tCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgca                                        >  1:10886094‑M2/1‑42 (MQ=255)

         tCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgca                                        >  1:1388947‑M2/1‑42 (MQ=255)

            gTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccc                                     <  1:2454374‑M2/51‑13 (MQ=255)

             tAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccca                                    <  1:2507436‑M2/51‑14 (MQ=255)

             tAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccca                                    <  1:7552775‑M2/51‑14 (MQ=255)

             tAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccca                                    >  1:10164018‑M2/1‑38 (MQ=255)

              aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat                                   >  1:9877670‑M2/1‑37 (MQ=255)

              aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat                                   <  1:8947230‑M2/51‑15 (MQ=255)

              aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat                                   >  1:6582731‑M2/1‑37 (MQ=255)

              aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat                                   >  1:3060397‑M2/1‑37 (MQ=255)

               aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatt                                  >  1:1667684‑M2/1‑36 (MQ=255)

               aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatt                                  >  1:8046317‑M2/1‑36 (MQ=255)

               aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatt                                  <  1:2963329‑M2/51‑16 (MQ=255)

               aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact                                           <  1:5954874‑M2/42‑7 (MQ=255)

                atatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattt                                 <  1:7954178‑M2/51‑17 (MQ=255)

                atatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattt                                 <  1:4896577‑M2/51‑17 (MQ=255)

                atatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattt                                 <  1:1832214‑M2/51‑17 (MQ=255)

                 tatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatttt                                >  1:1333379‑M2/1‑34 (MQ=255)

                 tatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatttt                                >  1:958718‑M2/1‑34 (MQ=255)

                 tatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatttt                                >  1:4295117‑M2/1‑34 (MQ=255)

                  atTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttg                               >  1:2035672‑M2/1‑33 (MQ=255)

                  atTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttg                               <  1:2795272‑M2/51‑19 (MQ=255)

                  atTAAAAAACAGGCGGTGCGGTTTTCCCGATTCtgtactgcacccattttg                               >  1:5571591‑M2/1‑33 (MQ=255)

                   ttAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgt                              >  1:8995898‑M2/1‑32 (MQ=255)

                   ttAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgt                              <  1:10769726‑M2/51‑20 (MQ=255)

                   ttAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgt                              <  1:9872975‑M2/51‑20 (MQ=255)

                     aaaaaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttg                            <  1:3000109‑M2/51‑22 (MQ=255)

                      aaaaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttgg                           >  1:10774791‑M2/1‑29 (MQ=255)

                      aaaaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttgg                           <  1:1617259‑M2/51‑23 (MQ=255)

                        aaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggac                         >  1:7550268‑M2/1‑27 (MQ=255)

                        aaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggac                         <  1:5299056‑M2/51‑25 (MQ=255)

                         aaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacg                        >  1:2265415‑M2/1‑26 (MQ=255)

                         aaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacg                        <  1:1335976‑M2/51‑26 (MQ=255)

                          aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga                       >  1:622009‑M2/1‑25 (MQ=255)

                          aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga                       >  1:10736730‑M2/1‑25 (MQ=255)

                          aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga                       <  1:1072872‑M2/51‑27 (MQ=255)

                          aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga                       <  1:5697691‑M2/51‑27 (MQ=255)

                          aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga                       <  1:6465050‑M2/51‑27 (MQ=255)

                           cAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgat                      <  1:3089066‑M2/51‑28 (MQ=255)

                           cAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgat                      <  1:10666783‑M2/51‑28 (MQ=255)

                            aGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgatg                     >  1:7414863‑M2/1‑23 (MQ=255)

                             ggCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgatga                    >  1:2959314‑M2/1‑22 (MQ=255)

                             ggCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggac                         >  1:1469673‑M2/1‑22 (MQ=255)

                              gcggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaa                   <  1:9409553‑M2/51‑31 (MQ=255)

                               cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa                  <  1:4039446‑M2/51‑32 (MQ=255)

                               cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa                  >  1:4015650‑M2/1‑20 (MQ=255)

                               cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa                  <  1:9316379‑M2/51‑32 (MQ=255)

                               cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa                  >  1:6878884‑M2/1‑20 (MQ=255)

                               cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa                  >  1:6283684‑M2/1‑20 (MQ=255)

                                ggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaat                 >  1:4311743‑M2/1‑19 (MQ=255)

                                 gttcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatg                <  1:8118669‑M2/51‑34 (MQ=255)

                                 gtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatg                >  1:8656290‑M2/1‑18 (MQ=255)

                                 gtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatg                <  1:8503310‑M2/51‑34 (MQ=255)

                                 gtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatg                >  1:6280341‑M2/1‑18 (MQ=255)

                                  tgcagtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatgg               >  1:2753882‑M2/1‑17 (MQ=255)

                                   gcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatgga              >  1:2310513‑M2/1‑16 (MQ=255)

                                    cggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaa             >  1:413444‑M2/1‑15 (MQ=255)

                                     ggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaat            <  1:7303650‑M2/51‑38 (MQ=255)

                                     ggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaat            <  1:2948214‑M2/51‑38 (MQ=255)

                                     ggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaat            <  1:9799242‑M2/51‑38 (MQ=255)

                                      gtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaata           >  1:621790‑M2/1‑13 (MQ=255)

                                      gtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaata           >  1:5055481‑M2/1‑13 (MQ=255)

                                        tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc         <  1:9478596‑M2/51‑41 (MQ=255)

                                        tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc         >  1:9393202‑M2/1‑11 (MQ=255)

                                        tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc         <  1:3314399‑M2/51‑41 (MQ=255)

                                        tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc         >  1:6915339‑M2/1‑11 (MQ=255)

                                          tCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccc       >  1:184970‑M2/1‑9 (MQ=255)

                                          tCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccc       <  1:5543367‑M2/51‑43 (MQ=255)

                                          tCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccc       >  1:9211687‑M2/1‑9 (MQ=255)

                                           ccTGATTCtgtactgcacccattttgttggacgatgaaatggaatagcccc      <  1:3873982‑M2/51‑44 (MQ=255)

                                             tGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta    >  1:7438357‑M2/1‑6 (MQ=255)

                                             tGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta    >  1:2188985‑M2/1‑6 (MQ=255)

                                             tGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta    >  1:7900312‑M2/1‑6 (MQ=255)

                                              gATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa   >  1:7650150‑M2/1‑5 (MQ=255)

                                              gATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa   <  1:5887359‑M2/51‑47 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  >  1:6862280‑M2/1‑4 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  <  1:10447718‑M2/51‑48 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  >  1:1213918‑M2/1‑4 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  >  1:9637372‑M2/1‑4 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  >  1:715164‑M2/1‑4 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  <  1:2504675‑M2/51‑48 (MQ=255)

                                               aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat  >  1:2655954‑M2/1‑4 (MQ=255)

TTTTCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCCAGTAATAATAAGTCGATACCTGAATTAAAGGCGTTAGGCGGGCAAC  >  REL606/4047625‑4047722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`