| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,981,782 | IS150 (–) +3 bp | 100% | coding (249‑251/1224 nt) | ECB_03710 ← | putative permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 105 (1.110) | 53/80 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3981782 = | 0 (0.000) | coding (251/1224 nt) | ECB_03710 | putative permease | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 117 (1.270) | 59/78 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 3981784 | 0 (0.000) | coding (249/1224 nt) | ECB_03710 | putative permease | |||||
Only 100 of 303 total aligned reads displayed.
CAGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCTTTTTC > REL606/3981734‑3981834 | aGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTt < 1:1725153‑M2/51‑2 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta < 1:2921390‑M2/51‑5 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta < 1:6622954‑M2/51‑5 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta < 1:2079046‑M2/51‑5 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta < 1:7656637‑M2/51‑5 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta > 1:8385350‑M2/1‑47 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGcc < 1:3832801‑M2/8‑1 (MQ=255) gAACAGACTTATCGCCATCAAAATGTTAAAGGCGATGGCCCCTTTTtgtac < 1:9260834‑M2/51‑6 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCaa < 1:5332138‑M2/10‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCaa < 1:752004‑M2/10‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCaa < 1:5539890‑M2/10‑1 (MQ=255) aCAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactg < 1:8093587‑M2/51‑8 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAAc < 1:10844305‑M2/12‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAAc < 1:3990431‑M2/12‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGaa < 1:5518176‑M2/15‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGaa > 1:8570111‑M2/37‑51 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGaa > 1:7730265‑M2/37‑51 (MQ=255) ttATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgacccca < 1:1823799‑M2/51‑14 (MQ=255) ttATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgacccca > 1:3176480‑M2/1‑38 (MQ=255) tATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaa < 1:3453223‑M2/51‑15 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAatat < 1:2108488‑M2/18‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAatat > 1:10563099‑M2/34‑51 (MQ=255) aTCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaa > 1:2564835‑M2/1‑36 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATAttt < 1:10380712‑M2/20‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTc < 1:2160372‑M2/21‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTc > 1:1355753‑M2/31‑51 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTca > 1:8432596‑M2/30‑51 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTca < 1:9510704‑M2/22‑1 (MQ=255) cATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagtt < 1:4154528‑M2/51‑21 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTcaca < 1:5869918‑M2/24‑1 (MQ=255) aTCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttg > 1:6602745‑M2/1‑30 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACaa > 1:4910820‑M2/27‑51 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACaa < 1:6436259‑M2/25‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACaa < 1:10002636‑M2/25‑1 (MQ=255) tCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgg > 1:7294723‑M2/1‑29 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga < 1:5069949‑M2/51‑24 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga < 1:8031071‑M2/51‑24 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga < 1:543386‑M2/51‑24 (MQ=255) gtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATg < 1:4241868‑M2/27‑1 (MQ=255) aaaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggaca > 1:7052163‑M2/1‑26 (MQ=255) ccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGcc > 1:5023688‑M2/23‑51 (MQ=255) aaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacag > 1:9385046‑M2/1‑25 (MQ=255) aaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacag < 1:5951194‑M2/51‑27 (MQ=255) caacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCa < 1:4480169‑M2/30‑1 (MQ=255) caacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCa > 1:4294239‑M2/22‑51 (MQ=255) aTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagt > 1:2432203‑M2/1‑24 (MQ=255) aTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagt > 1:10695749‑M2/1‑24 (MQ=255) aacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCAt > 1:9950550‑M2/21‑51 (MQ=255) aacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCAt > 1:2741377‑M2/21‑51 (MQ=255) aacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCAt > 1:4430487‑M2/21‑51 (MQ=255) ttAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaa < 1:4777226‑M2/51‑31 (MQ=255) caaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATAc < 1:6487970‑M2/33‑1 (MQ=255) caaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATAc < 1:7193710‑M2/33‑1 (MQ=255) tAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaa < 1:9864800‑M2/51‑32 (MQ=255) tAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaa > 1:8711911‑M2/1‑20 (MQ=255) tAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaa < 1:10328540‑M2/51‑32 (MQ=255) aaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACg < 1:3585595‑M2/34‑1 (MQ=255) aaTGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaac < 1:8862695‑M2/51‑33 (MQ=255) tGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacac > 1:8764402‑M2/1‑17 (MQ=255) atgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTg < 1:1698538‑M2/37‑1 (MQ=255) ggCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaa < 1:6889164‑M2/46‑31 (MQ=255) gggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGc > 1:3355650‑M2/13‑51 (MQ=255) gggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGc > 1:3732813‑M2/13‑51 (MQ=255) ggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCa < 1:1919408‑M2/40‑1 (MQ=255) cGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgag < 1:10219656‑M2/51‑38 (MQ=255) gtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAg > 1:7759893‑M2/11‑51 (MQ=255) gtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAg < 1:3219680‑M2/41‑1 (MQ=255) tGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:6316447‑M2/51‑41 (MQ=255) tGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:5258169‑M2/51‑41 (MQ=255) gCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcata < 1:2225940‑M2/51‑43 (MQ=255) agtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCgg > 1:6129043‑M2/7‑51 (MQ=255) agtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCgg > 1:107562‑M2/7‑51 (MQ=255) agtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCgg > 1:6550939‑M2/7‑51 (MQ=255) cccTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:6093045‑M2/51‑45 (MQ=255) ccTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:1556001‑M2/1‑6 (MQ=255) caTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCtt < 1:2374255‑M2/49‑1 (MQ=255) cTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:6256715‑M2/51‑47 (MQ=255) cTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:1232274‑M2/51‑47 (MQ=255) tttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:8916505‑M2/51‑48 (MQ=255) tttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:7084381‑M2/51‑48 (MQ=255) tttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:5598993‑M2/51‑48 (MQ=255) aTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCggg > 1:96185‑M2/2‑47 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:7861277‑M2/1‑3 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:8211376‑M2/51‑49 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:3927485‑M2/1‑3 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:1157099‑M2/51‑49 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:9053560‑M2/51‑49 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:6963847‑M2/47‑45 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:1675030‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:2773449‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:7479815‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:3133107‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:10911189‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:7259700‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:10279084‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:8323360‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:6839221‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:9680884‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:4650009‑M2/51‑50 (MQ=255) tttCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCttttt < 1:5136438/51‑1 (MQ=255) | CAGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCTTTTTC > REL606/3981734‑3981834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |