| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,990,387 | IS150 (+) +3 bp | 100% | coding (1250‑1252/1491 nt) | ECB_03719 ← | conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3652533 | NA (NA) | 124 (1.380) | 59/76 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3990387 = | 0 (0.000) | coding (1252/1491 nt) | ECB_03719 | conserved hypothetical protein | |||||
| * | ? | REL606 | 3893554 = | NA (NA) | 97 (1.050) | 60/78 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 3990389 | 0 (0.000) | coding (1250/1491 nt) | ECB_03719 | conserved hypothetical protein | |||||
Only 100 of 282 total aligned reads displayed.
TGCCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACCA > REL606/3990337‑3990437 | gNCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGc > 1:468992/1‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCa < 1:9794313‑M2/3‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCa > 1:4652918‑M2/49‑51 (MQ=255) ccGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCa > 1:2358899/1‑51 (MQ=255) cGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAt < 1:2078416‑M2/51‑2 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCAt > 1:4116785‑M2/48‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATa < 1:1955380‑M2/5‑1 (MQ=255) gATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgt < 1:7257911‑M2/51‑4 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATaa < 1:371592‑M2/6‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAAt < 1:4376567‑M2/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAAt > 1:2678255‑M2/45‑51 (MQ=255) atatCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgta > 1:4924536‑M2/1‑47 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg < 1:4905633‑M2/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg > 1:112754‑M2/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg < 1:9454791‑M2/8‑1 (MQ=255) tcctccTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactg < 1:4784922‑M2/51‑8 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGcc > 1:2708385‑M2/42‑51 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGcc > 1:9442093‑M2/42‑51 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCa < 1:9296270‑M2/11‑1 (MQ=255) cctcctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgc > 1:3644846‑M2/1‑43 (MQ=255) ctcctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgca > 1:8604860‑M2/1‑42 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACa > 1:8100884‑M2/38‑51 (MQ=255) cctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacc > 1:10332945‑M2/1‑40 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaGCATAATTCCAACAt > 1:1658123‑M2/37‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACAt > 1:7523424‑M2/37‑51 (MQ=255) ctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcaccc < 1:4618310‑M2/51‑13 (MQ=255) tttCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcaccca > 1:5574906‑M2/1‑38 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATc > 1:3334352‑M2/36‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCa < 1:5727755‑M2/17‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaa < 1:10058576‑M2/18‑1 (MQ=255) tCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatt > 1:3977563‑M2/1‑36 (MQ=255) tCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatt > 1:3371732‑M2/1‑36 (MQ=255) gtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaa > 1:8395983‑M2/33‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa < 1:6061693‑M2/20‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa > 1:9238124‑M2/32‑51 (MQ=255) tGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatttt < 1:5286775‑M2/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaaa < 1:10703621‑M2/21‑1 (MQ=255) gCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatt > 1:3077863‑M2/1‑33 (MQ=255) taactgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAg < 1:389896‑M2/22‑1 (MQ=255) cATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgt < 1:8529873‑M2/51‑20 (MQ=255) aTGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgtt > 1:328230‑M2/1‑31 (MQ=255) aTGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgtt > 1:8316645‑M2/1‑31 (MQ=255) tGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttg < 1:3206234‑M2/51‑22 (MQ=255) gAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttgg > 1:7839584‑M2/1‑29 (MQ=255) ctgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCt > 1:7279987‑M2/27‑51 (MQ=255) ctgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCt > 1:5688408‑M2/27‑51 (MQ=255) tgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTa < 1:3470156‑M2/26‑1 (MQ=255) tgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTa < 1:6001522‑M2/26‑1 (MQ=255) aaaTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttgga < 1:8244302‑M2/51‑24 (MQ=255) aaTAGCCCACCACGCCTGCAATCAGCAtgtactgcacctattttgttggac > 1:10505394‑M2/1‑27 (MQ=255) aaTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggac > 1:8955824‑M2/1‑27 (MQ=255) aaTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggac > 1:3531212‑M2/1‑27 (MQ=255) tccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTAtt < 1:4479395‑M2/28‑1 (MQ=255) tccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTAtt > 1:5332622‑M2/24‑51 (MQ=255) aTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacg > 1:1420102‑M2/1‑26 (MQ=255) aTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacg < 1:6193392‑M2/51‑26 (MQ=255) caactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGt > 1:6561760‑M2/22‑51 (MQ=255) aGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgat < 1:4262077‑M2/51‑28 (MQ=255) gCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatg < 1:1215172‑M2/51‑29 (MQ=255) gCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatg > 1:10430843‑M2/1‑23 (MQ=255) gCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatg > 1:815618‑M2/1‑23 (MQ=255) gCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatg > 1:10634839‑M2/1‑23 (MQ=255) aactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGtt < 1:5081248‑M2/31‑1 (MQ=255) ctttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTNa < 1:1567544‑M2/33‑1 (MQ=255) ctttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCa < 1:8012789‑M2/33‑1 (MQ=255) tttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCaa > 1:4413552‑M2/18‑51 (MQ=255) caccacGCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaa < 1:6471376‑M2/51‑32 (MQ=255) ttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAAc < 1:9928304‑M2/35‑1 (MQ=255) ttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAAc < 1:7688580‑M2/35‑1 (MQ=255) ttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAAc > 1:1781966‑M2/17‑51 (MQ=255) ttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAAc < 1:9402906‑M2/35‑1 (MQ=255) cacGCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatgg > 1:6792771‑M2/1‑17 (MQ=255) tggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCa > 1:7737406‑M2/14‑51 (MQ=255) gggtgcagtaca‑CATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATa < 1:10497976‑M2/39‑1 (MQ=255) gggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATa < 1:5471836‑M2/40‑1 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat > 1:8806137‑M2/1‑14 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat < 1:2118948‑M2/51‑38 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat > 1:6899006‑M2/1‑14 (MQ=255) ggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATaa > 1:2009809‑M2/11‑51 (MQ=255) gtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAg > 1:10264770‑M2/10‑51 (MQ=255) tGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagc < 1:2914341‑M2/51‑41 (MQ=255) tGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagc > 1:5822832‑M2/1‑11 (MQ=255) gCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:2610206‑M2/1‑10 (MQ=255) cAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:9749259‑M2/51‑43 (MQ=255) cAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:886978‑M2/51‑43 (MQ=255) agtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTcc < 1:5193868‑M2/45‑1 (MQ=255) agtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTcc < 1:3084892‑M2/45‑1 (MQ=255) tacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCg > 1:7207524‑M2/5‑51 (MQ=255) tacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCg < 1:9629546‑M2/47‑1 (MQ=255) tacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCg > 1:2250388‑M2/5‑51 (MQ=255) acaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGa > 1:3849192‑M2/4‑51 (MQ=255) acaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGa < 1:387899‑M2/48‑1 (MQ=255) cAGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:684779‑M2/51‑47 (MQ=255) cAGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:2478104‑M2/1‑5 (MQ=255) aGCAtgtactgcacccattttgttggaggatgaaatggaatagcccctaat > 1:10411030‑M2/1‑4 (MQ=255) aGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:1403635‑M2/1‑4 (MQ=255) aGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:7076014‑M2/1‑4 (MQ=255) aGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGAcc < 1:6735629‑M2/50‑1 (MQ=255) gCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACca > 1:69904/1‑51 (MQ=255) gCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACca > 1:8781200/1‑51 (MQ=255) | TGCCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACCA > REL606/3990337‑3990437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |