| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,102,032 | IS150 (–) +3 bp | 100% | coding (756‑758/1065 nt) | phoH → | conserved protein with nucleoside triphosphate hydrolase domain |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 114 (1.200) | 59/80 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | = 1102034 | 0 (0.000) | coding (758/1065 nt) | phoH | conserved protein with nucleoside triphosphate hydrolase domain | |||||
| * | ? | REL606 | 664688 = | NA (NA) | 97 (1.020) | 56/80 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1102032 = | 0 (0.000) | coding (756/1065 nt) | phoH | conserved protein with nucleoside triphosphate hydrolase domain | |||||
Only 100 of 326 total aligned reads displayed.
GCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATG > REL606/1101984‑1102084 | tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa < 1:5286834‑M2/3‑1 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa > 1:2297803‑M2/49‑51 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa > 1:271260‑M2/49‑51 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa < 1:8346354‑M2/3‑1 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa > 1:1170416‑M2/49‑51 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa < 1:3755531‑M2/3‑1 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa > 1:4249474‑M2/49‑51 (MQ=255)tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGaa < 1:5085047‑M2/3‑1 (MQ=255) cgcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAt < 1:5588872‑M2/51‑2 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAg < 1:8217130‑M2/4‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAgg < 1:2450706‑M2/5‑1 (MQ=255) gcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtg < 1:10670656‑M2/51‑3 (MQ=255) gcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtg > 1:319966‑M2/1‑49 (MQ=255) gcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtg > 1:996417‑M2/1‑49 (MQ=255) cTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgt < 1:3833453‑M2/51‑4 (MQ=255) ttAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgta < 1:488223‑M2/51‑5 (MQ=255) ttAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgta < 1:2194955‑M2/51‑5 (MQ=255) aGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtact < 1:7356600‑M2/51‑7 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTg < 1:10280118‑M2/14‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgc < 1:9101845‑M2/15‑1 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgcg > 1:9683071‑M2/36‑51 (MQ=255) tCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgacccca > 1:7695781‑M2/1‑38 (MQ=255) tCCTTTATGCAGTACTACCTGCGACCGGAAATAGGGAAtgtactgacccca < 1:550485‑M2/51‑14 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgcgc > 1:10058206‑M2/35‑51 (MQ=255) ccTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaa < 1:7458574‑M2/51‑15 (MQ=255) ccTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaa > 1:7247360‑M2/1‑37 (MQ=255) cTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaa < 1:5715758‑M2/51‑16 (MQ=255) cTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaa < 1:839159‑M2/51‑16 (MQ=255) tttATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaa < 1:5570507‑M2/51‑17 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCg > 1:3965037‑M2/33‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGt < 1:2563963‑M2/20‑1 (MQ=255) ttATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaa > 1:10616477‑M2/1‑34 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGtt > 1:3181931‑M2/31‑51 (MQ=255) aTGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagt < 1:6381657‑M2/51‑20 (MQ=255) aTGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagt < 1:9414562‑M2/51‑20 (MQ=255) tGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagtt < 1:9370659‑M2/51‑21 (MQ=255) tGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagtt < 1:8306147‑M2/51‑21 (MQ=255) catcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCg > 1:6019679‑M2/29‑51 (MQ=255) gCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttg < 1:6264811‑M2/51‑22 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga < 1:10072486‑M2/51‑24 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga > 1:6158074‑M2/1‑28 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga > 1:1815137‑M2/1‑28 (MQ=255) gtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCta < 1:1558479‑M2/27‑1 (MQ=255) gTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttggac > 1:8434991‑M2/1‑27 (MQ=255) gTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttggac > 1:10118263‑M2/1‑27 (MQ=255) tccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCtat > 1:10361451‑M2/24‑51 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt < 1:853246‑M2/51‑28 (MQ=255) aacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATg < 1:642347‑M2/31‑1 (MQ=255) aacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATg < 1:7202313‑M2/31‑1 (MQ=255) gcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtta > 1:4607452‑M2/1‑22 (MQ=255) cctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaa < 1:6611542‑M2/51‑31 (MQ=255) caaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCg > 1:2663458‑M2/19‑51 (MQ=255) caaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCg < 1:2974087‑M2/33‑1 (MQ=255) ctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaa < 1:10521668‑M2/51‑32 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac > 1:525659‑M2/1‑19 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac < 1:5816311‑M2/51‑33 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac < 1:4559724‑M2/51‑33 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac > 1:7111004‑M2/1‑19 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtta > 1:4169224‑M2/1‑19 (MQ=255) gcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac > 1:10801616‑M2/1‑18 (MQ=255) aatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTgg > 1:5210179‑M2/16‑51 (MQ=255) aatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTgg > 1:8063126‑M2/16‑51 (MQ=255) cGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacac < 1:4117359‑M2/51‑35 (MQ=255) atgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGNa < 1:4943349‑M2/37‑1 (MQ=255) gACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaa < 1:5386768‑M2/46‑31 (MQ=255) gtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTa < 1:6501167‑M2/41‑1 (MQ=255) tgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTAc > 1:10231650‑M2/10‑51 (MQ=255) tgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTAc < 1:5934335‑M2/42‑1 (MQ=255) ggAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:6053705‑M2/51‑40 (MQ=255) ggAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:961312‑M2/51‑40 (MQ=255) aaaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:9837328‑M2/51‑42 (MQ=255) agtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCtt < 1:6991413‑M2/45‑1 (MQ=255) aaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcata < 1:1427480‑M2/51‑43 (MQ=255) gtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCttt < 1:809760‑M2/46‑1 (MQ=255) gtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCttt > 1:2009986‑M2/6‑51 (MQ=255) tAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:7597830‑M2/51‑45 (MQ=255) aGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:8887454‑M2/51‑46 (MQ=255) aGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:3048556‑M2/1‑6 (MQ=255) aGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:7923464‑M2/1‑6 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:6796317‑M2/51‑49 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:3486226‑M2/51‑49 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:6910835‑M2/51‑49 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:4286744‑M2/51‑49 (MQ=255) aatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:5679708‑M2/51‑50 (MQ=255) aatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:10179544‑M2/51‑50 (MQ=255) aatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:8620492‑M2/1‑2 (MQ=255) aatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:6859662‑M2/51‑50 (MQ=255) aatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:1964020‑M2/1‑2 (MQ=255) aaGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAAt < 1:7850970/51‑1 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:3562341‑M2/51‑51 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:8256787‑M2/51‑51 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:10429666‑M2/51‑51 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:1257376‑M2/51‑51 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:8815675‑M2/51‑51 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg > 1:28988‑M2/1‑1 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg > 1:9533526‑M2/1‑1 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg > 1:482192‑M2/1‑1 (MQ=255) atgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 1:1644158‑M2/51‑51 (MQ=255) aGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATg > 1:3720304/1‑51 (MQ=255) aGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATg > 1:5778192/1‑51 (MQ=255) | GCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATG > REL606/1101984‑1102084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |