| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,270,443 | IS150 (–) +4 bp | 100% | intergenic (+21/+24) | nlp → / ← murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3270443 = | 0 (0.000) | 77 (0.810) | 49/80 | NT | 100% | intergenic (+21/+27) | nlp/murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3270446 | 0 (0.000) | 111 (1.170) | 56/80 | NT | 100% | intergenic (+24/+24) | nlp/murA | DNA‑binding transcriptional activator of maltose metabolism/UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| ? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 249 total aligned reads displayed.
CGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATT > REL606/3270396‑3270496 | cGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTa < 1:3621708/51‑1 (MQ=255)cGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTa > 1:10243779/1‑51 (MQ=255)attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTa < 1:7548344‑M1/4‑1 (MQ=255)attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTa < 1:4558701‑M1/4‑1 (MQ=255)attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTa > 1:7349130‑M1/48‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTAc < 1:6117799‑M1/5‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTAc > 1:6896667‑M1/47‑51 (MQ=255) gTAGCTACACTAAGCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAt > 1:133876‑M1/1‑50 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACg < 1:5343275‑M1/6‑1 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACg > 1:8874887‑M1/46‑51 (MQ=255) aGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgt > 1:10619845‑M1/1‑48 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACggg > 1:7212322‑M1/44‑51 (MQ=255) gCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgta > 1:7462655‑M1/1‑47 (MQ=255) tACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtact < 1:1005167‑M1/51‑7 (MQ=255) tACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtact < 1:7783346‑M1/51‑7 (MQ=255) gnctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGc < 1:655086‑M1/10‑1 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCt > 1:2853872‑M1/41‑51 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTg > 1:7930112‑M1/40‑51 (MQ=255) cacTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactga > 1:2143620‑M1/1‑43 (MQ=255) cacTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactga > 1:685136‑M1/1‑43 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGc < 1:8019874‑M1/13‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCa > 1:8966270‑M1/37‑51 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAg > 1:6043814‑M1/36‑51 (MQ=255) aaaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgacccc < 1:6983712‑M1/51‑13 (MQ=255) aaaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgacccc > 1:9441255‑M1/1‑39 (MQ=255) aaaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgacccc > 1:2228697‑M1/1‑39 (MQ=255) aaaCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgacccc > 1:9779385‑M1/1‑39 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCt > 1:4364415‑M1/34‑51 (MQ=255) aCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaa > 1:5217122‑M1/1‑37 (MQ=255) aCCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaa < 1:3313493‑M1/51‑15 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCtt > 1:2051116‑M1/33‑51 (MQ=255) cGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaa > 1:4680994‑M1/1‑35 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTc > 1:10934144‑M1/31‑51 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTc > 1:9623082‑M1/31‑51 (MQ=255) gAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaa < 1:25715‑M1/51‑18 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCa > 1:1777144‑M1/30‑51 (MQ=255) aaaaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaag < 1:309607‑M1/51‑19 (MQ=255) aaaaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaag > 1:2460847‑M1/1‑33 (MQ=255) catcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAg < 1:5005634‑M1/23‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAg > 1:9162805‑M1/29‑51 (MQ=255) aaaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagt < 1:145462‑M1/51‑20 (MQ=255) aaaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagt > 1:6410589‑M1/1‑32 (MQ=255) aaaaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagt < 1:4947070‑M1/51‑20 (MQ=255) atcgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGa > 1:7428919‑M1/28‑51 (MQ=255) aaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttg < 1:3151571‑M1/51‑22 (MQ=255) aaaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttg < 1:10133610‑M1/51‑22 (MQ=255) cgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACg < 1:8611509‑M1/26‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACg < 1:4840074‑M1/26‑1 (MQ=255) aaTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttgg < 1:5759175‑M1/51‑23 (MQ=255) aTGAGTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttgga > 1:9310271‑M1/1‑28 (MQ=255) tccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGAt < 1:8092889‑M1/28‑1 (MQ=255) ccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGAtt < 1:5691645‑M1/29‑1 (MQ=255) ccaacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTCTCAGACGAtt > 1:10116078‑M1/23‑51 (MQ=255) gTGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagt > 1:4036934‑M1/1‑24 (MQ=255) aacaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTAc > 1:2084776‑M1/21‑51 (MQ=255) tGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagtt > 1:2478749‑M1/1‑23 (MQ=255) tGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagtt < 1:10440425‑M1/51‑29 (MQ=255) tGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagtt < 1:345852‑M1/51‑29 (MQ=255) tGGTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagtt < 1:986637‑M1/51‑29 (MQ=255) acaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACt > 1:2734233‑M1/20‑51 (MQ=255) acaaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACt > 1:1238713‑M1/20‑51 (MQ=255) ggTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagtta > 1:7452278‑M1/1‑22 (MQ=255) gTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaa > 1:1540490‑M1/1‑21 (MQ=255) gTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaa < 1:413243‑M1/51‑31 (MQ=255) gTCTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaa < 1:5207983‑M1/51‑31 (MQ=255) aaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCg > 1:9058688‑M1/18‑51 (MQ=255) aaaatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCg > 1:2264829‑M1/18‑51 (MQ=255) cTGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaac < 1:3430735‑M1/51‑33 (MQ=255) aatgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGcc < 1:4289811‑M1/36‑1 (MQ=255) tGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaaca > 1:10572057‑M1/1‑18 (MQ=255) tGGCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaaca > 1:7951970‑M1/1‑18 (MQ=255) atgggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCt > 1:7694453‑M1/15‑51 (MQ=255) gggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCttt > 1:3807314‑M1/13‑51 (MQ=255) gggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCttt > 1:692089‑M1/13‑51 (MQ=255) gCGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacg > 1:5837253‑M1/1‑16 (MQ=255) ggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTc < 1:9032173‑M1/40‑1 (MQ=255) ggtgcagtacaCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTc > 1:9481296‑M1/12‑51 (MQ=255) cGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacga > 1:7251127‑M1/1‑15 (MQ=255) cGGTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacga < 1:6191367‑M1/51‑37 (MQ=255) ggTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgag > 1:1283950‑M1/1‑14 (MQ=255) ggTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgag < 1:3784523‑M1/51‑38 (MQ=255) ggTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgag < 1:4778379‑M1/51‑38 (MQ=255) ggTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgag > 1:6660603‑M1/1‑14 (MQ=255) gTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgagg > 1:8952294‑M1/1‑13 (MQ=255) gTAGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaac < 1:7578785‑M1/45‑33 (MQ=255) aGCCCCGCGTAtgtactggccccaaaaagttggacagttaaacacgaggca < 1:6598397‑M1/51‑41 (MQ=255) aGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgaggca > 1:6444909‑M1/1‑11 (MQ=255) aGCCCCGCGTAtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:2689937‑M1/51‑41 (MQ=255) ccGCGTAtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:8440901‑M1/51‑45 (MQ=255) aCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCaa < 1:9901726‑M1/50‑1 (MQ=255) aCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCaa > 1:6509135‑M1/2‑51 (MQ=255) gTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAata < 1:2924154/51‑1 (MQ=255) tAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:5601161‑M1/1‑2 (MQ=255) tAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:3021895‑M1/51‑50 (MQ=255) tAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:6366847‑M1/1‑2 (MQ=255) tACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAatat < 1:8690026/51‑1 (MQ=255) tACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAatat < 1:2916340/51‑1 (MQ=255) tACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAatat > 1:3864540/1‑51 (MQ=255) tACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAatat > 1:4731143/1‑51 (MQ=255) aCGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATAtt < 1:4513895/51‑1 (MQ=255) | CGTAGCTACACTAAACCGAAAAAATGAGTGGTCTGGCGGTAGCCCCGCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATT > REL606/3270396‑3270496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |