Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 651,703 +GAA :: IS150 (+) +2 bp 100% intergenic (‑83/+176) ybeB ← / ← phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 651703 =1 (0.010)98 (1.030) 53/80 NT 98.9% intergenic (‑83/+177) ybeB/phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase
?REL606 = 666130 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 6517041 (0.010)91 (1.010)
+GA
56/76 NT 98.9% intergenic (‑84/+176) ybeB/phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase
?REL606 3651090 = NA (NA)intergenic (‑32/‑48) hokA/insJ‑4 toxic polypeptide, small/IS150 hypothetical protein

Only 100 of 257 total aligned reads displayed.

ATGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTGC  >  REL606/651653‑651753
                                                  |                                                  
aTGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGcc                                                    >  1:7163930/1‑51 (MQ=255)
  ggTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGg                                                  >  1:10689647‑M1/1‑50 (MQ=255)
  gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGa                                                  <  1:4981858‑M1/3‑1 (MQ=255)
  gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGa                                                  >  1:3368940‑M1/49‑51 (MQ=255)
  gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGa                                                  <  1:8556484‑M1/3‑1 (MQ=255)
   gTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGga                                                 >  1:6264963‑M1/1‑49 (MQ=255)
   acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGaa                                                 >  1:3862632‑M1/48‑51 (MQ=255)
    tCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaa                                                >  1:6669634‑M1/1‑48 (MQ=255)
    tCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaa                                                <  1:4830394‑M1/51‑4 (MQ=255)
     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATc                                               <  1:2300800‑M1/6‑1 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                               <  1:7438501‑M1/51‑5 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                               >  1:3671112‑M1/1‑47 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                               >  1:6035878‑M1/1‑47 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                               <  1:1942564‑M1/51‑5 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                              >  1:6855330‑M1/45‑51 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                              <  1:488403‑M1/7‑1 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                              >  1:5559758‑M1/45‑51 (MQ=255)
      tGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatg                                              >  1:5081068‑M1/1‑46 (MQ=255)
        tCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgta                                            <  1:9257455‑M1/51‑8 (MQ=255)
        tCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGAATCGGc                                            >  1:9093531/1‑51 (MQ=255)
         cAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtac                                           >  1:7277644‑M1/1‑43 (MQ=255)
          aGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtact                                          <  1:56799‑M1/51‑10 (MQ=255)
          aGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtact                                          <  1:1258781‑M1/51‑10 (MQ=255)
          aGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtact                                          >  1:5853915‑M1/1‑42 (MQ=255)
          aGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtact                                          <  1:10122031‑M1/51‑10 (MQ=255)
          aGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtact                                          >  1:1822144‑M1/1‑42 (MQ=255)
           gcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCttt                                         >  1:2254185‑M1/40‑51 (MQ=255)
           gTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactg                                         <  1:9192259‑M1/51‑11 (MQ=255)
            tataCCTGAACTAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgc                                        <  1:268659‑M1/51‑12 (MQ=255)
            tataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgc                                        >  1:152206‑M1/1‑40 (MQ=255)
             ctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCg                                       >  1:3629604‑M1/38‑51 (MQ=255)
             ataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgca                                       >  1:10310762‑M1/1‑39 (MQ=255)
             ataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgca                                       <  1:4374550‑M1/51‑13 (MQ=255)
             ataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgca                                       <  1:10218785‑M1/51‑13 (MQ=255)
              taCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcac                                      <  1:10014627‑M1/51‑14 (MQ=255)
              taCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcac                                      >  1:7053495‑M1/1‑38 (MQ=255)
               cgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaa                                     <  1:6214866‑M1/16‑1 (MQ=255)
               cgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaa                                     <  1:3753168‑M1/16‑1 (MQ=255)
                gtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaaa                                    <  1:92472‑M1/17‑1 (MQ=255)
                gtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaaa                                    >  1:8875722‑M1/35‑51 (MQ=255)
                gtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaaa                                    >  1:8897784‑M1/35‑51 (MQ=255)
                ccTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcaccc                                    >  1:2208079‑M1/1‑36 (MQ=255)
                ccTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcaccc                                    <  1:1557041‑M1/51‑16 (MQ=255)
                ccTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacac                                    <  1:9600743‑M1/51‑16 (MQ=255)
                 tgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAg                                   >  1:698687‑M1/34‑51 (MQ=255)
                  gtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGt                                  <  1:6442337‑M1/19‑1 (MQ=255)
                   tttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTg                                 >  1:4483499‑M1/32‑51 (MQ=255)
                    ttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaa                                     >  1:7135197‑M1/31‑46 (MQ=255)
                     taactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTggg                               >  1:8652744‑M1/30‑51 (MQ=255)
                     taactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTggg                               >  1:6383564‑M1/30‑51 (MQ=255)
                     aCCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccatttt                               <  1:8725751‑M1/51‑21 (MQ=255)
                      ccAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttg                              >  1:10428376‑M1/1‑30 (MQ=255)
                       actgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCt                             <  1:7769548‑M1/24‑1 (MQ=255)
                       actgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCt                             >  1:1324054‑M1/28‑51 (MQ=255)
                        ctgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTa                            >  1:6549797‑M1/27‑51 (MQ=255)
                        ctgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTa                            <  1:1199830‑M1/25‑1 (MQ=255)
                        ctgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTa                            >  1:1150386‑M1/27‑51 (MQ=255)
                        agagGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgtt                            >  1:7531217‑M1/1‑28 (MQ=255)
                        agagGCGATTTCGGGACAATTGTCGCCGgaatgta                                            <  1:8451940‑M1/35‑8 (MQ=255)
                         gagGCGATTTCGGGACAATTGTCGCGGgaatgtactgcacccattttgttg                           <  1:4313013‑M1/51‑25 (MQ=255)
                         gagGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttg                           <  1:9341704‑M1/51‑25 (MQ=255)
                          gtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatc                          >  1:9199934‑M1/25‑51 (MQ=255)
                          gtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatc                          <  1:2334208‑M1/27‑1 (MQ=255)
                          agGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttgg                          >  1:1674890‑M1/1‑26 (MQ=255)
                            gCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggac                        <  1:6762493‑M1/51‑28 (MQ=255)
                             cGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacg                       <  1:4062446‑M1/51‑29 (MQ=255)
                              gATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacga                      >  1:5595887‑M1/1‑22 (MQ=255)
                              gATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacga                      >  1:7954840‑M1/1‑22 (MQ=255)
                               actttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATccc                     >  1:5451670‑M1/20‑51 (MQ=255)
                                 tttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAc                   <  1:4219636‑M1/34‑1 (MQ=255)
                                 tttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAc                   <  1:8058135‑M1/34‑1 (MQ=255)
                                  tCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaa                  <  1:4781945‑M1/51‑34 (MQ=255)
                                  tCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaa                  <  1:8256013‑M1/51‑34 (MQ=255)
                                   tttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAccc                 >  1:6304054‑M1/16‑51 (MQ=255)
                                   tttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAccc                 <  1:10514664‑M1/36‑1 (MQ=255)
                                   tttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAccc                 >  1:1842573‑M1/16‑51 (MQ=255)
                                    ttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAcccc                >  1:3149273‑M1/15‑51 (MQ=255)
                                     tggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcg               <  1:4172866‑M1/38‑1 (MQ=255)
                                      ggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcgc              >  1:3445816‑M1/13‑51 (MQ=255)
                                      gACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatgg              >  1:2772671‑M1/1‑14 (MQ=255)
                                       aCAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatgga             >  1:2491075‑M1/1‑13 (MQ=255)
                                       aCAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatgga             <  1:2089531‑M1/51‑39 (MQ=255)
                                        ggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCgcgc            >  1:5144620‑M1/11‑51 (MQ=255)
                                        ggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCgcgc            >  1:8771610‑M1/11‑51 (MQ=255)
                                        cAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaa            <  1:10376931‑M1/51‑40 (MQ=255)
                                          tcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccg          >  1:3215492‑M1/9‑51 (MQ=255)
                                          aTTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaata          <  1:8818087‑M1/51‑42 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCgcgc            <  1:1062137‑M1/41‑1 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccgc         >  1:977341‑M1/8‑51 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccgc         <  1:4545080‑M1/44‑1 (MQ=255)
                                            agtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCa        <  1:7332092‑M1/45‑1 (MQ=255)
                                            agtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCa        <  1:5505961‑M1/45‑1 (MQ=255)
                                            agtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCa        >  1:4290413‑M1/7‑51 (MQ=255)
                                             gtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAg       >  1:2964782‑M1/6‑51 (MQ=255)
                                             gtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAg       <  1:8207946‑M1/46‑1 (MQ=255)
                                               cGCCGgaatgtactgcacccattttgttggacgatgaaatggaatagcccc     <  1:4639421‑M1/51‑47 (MQ=255)
                                                gCCGgaatgtactgcacccattttgttggacgatgaaatggaatagcccct    <  1:2141397‑M1/51‑48 (MQ=255)
                                                 aCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTg   >  1:6190333‑M1/2‑51 (MQ=255)
                                                 aCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTg   >  1:2528796‑M1/2‑51 (MQ=255)
                                                  cGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTGc  >  1:8382620/1‑51 (MQ=255)
                                                  |                                                  
ATGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTGC  >  REL606/651653‑651753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.