| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,990,387 | IS150 (+) +3 bp | coding (1250‑1252/1491 nt) | ECB_03719 ← | conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3652533 | NA (NA) | 104 (1.360) | 63/96 | 0.0 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3990387 = | 0 (0.000) | coding (1252/1491 nt) | ECB_03719 | conserved hypothetical protein | |||||
| * | ? | REL606 | 3893554 = | NA (NA) | 78 (1.000) | 54/98 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 3990389 | 0 (0.000) | coding (1250/1491 nt) | ECB_03719 | conserved hypothetical protein | |||||
Only 100 of 189 total aligned reads displayed.
TGCCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACCA > REL606/3990337‑3990437 | gCCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGc > 1:3689217/1‑51 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGc > 1:3859282‑M2/50‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGc > 1:2209975‑M2/49‑50 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCa > 1:4652918‑M2/49‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCa < 1:1632644‑M2/3‑1 (MQ=255) ccGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCa > 1:2358899/1‑51 (MQ=255) ccGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCa < 1:6295342/51‑1 (MQ=255) cGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAt < 1:7218192‑M2/51‑2 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCAt > 1:4116785‑M2/48‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATa > 1:5302465‑M2/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATa < 1:1955380‑M2/5‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATaa < 1:3533209‑M2/6‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAAt < 1:4376567‑M2/7‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg > 1:112754‑M2/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg > 1:6766904‑M2/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATg > 1:4596225‑M2/44‑51 (MQ=255) atCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtact > 1:1405353‑M2/1‑45 (MQ=255) tcctccTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactg < 1:4784922‑M2/51‑8 (MQ=255) tcctccTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactg > 1:5868087‑M2/1‑44 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGcc > 1:2626954‑M2/42‑51 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGcc > 1:2708385‑M2/42‑51 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCa < 1:3367358‑M2/11‑1 (MQ=255) cctcctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgc > 1:3644846‑M2/1‑43 (MQ=255) tcctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcac < 1:5689643‑M2/51‑11 (MQ=255) tcctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcac < 1:2047398‑M2/51‑11 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAAc > 1:288264‑M2/39‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACa < 1:6186414‑M2/14‑1 (MQ=255) ctTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcaccc > 1:3083727‑M2/1‑39 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATc > 1:3334352‑M2/36‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCa < 1:5727755‑M2/17‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaa < 1:7011552‑M2/18‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaa > 1:3506074‑M2/34‑51 (MQ=255) tCTGCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatt < 1:4458214‑M2/51‑16 (MQ=255) gtttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaa > 1:3294904‑M2/33‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa > 1:3762703‑M2/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa < 1:6061693‑M2/20‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa > 1:2937364‑M2/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaa < 1:4384374‑M2/20‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaGCATAATGCCAACATc < 1:5093132‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaGCATAATGCCAACATc < 1:6477674‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaaa < 1:1849696‑M2/21‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaGCATAATGCCAACATCaaaaa < 1:46473‑M2/21‑1 (MQ=255) gCATGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccatt > 1:3077863‑M2/1‑33 (MQ=255) taactgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAg > 1:4665843‑M2/30‑51 (MQ=255) aactgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAgg < 1:2371765‑M2/23‑1 (MQ=255) aactgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAgg < 1:1544265‑M2/23‑1 (MQ=255) tGAAATAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttg < 1:3206234‑M2/51‑22 (MQ=255) ctgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCt > 1:7279987‑M2/27‑51 (MQ=255) ctgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCt > 1:7156114‑M2/27‑51 (MQ=255) tgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTa < 1:3911921‑M2/26‑1 (MQ=255) tgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTa < 1:6001522‑M2/26‑1 (MQ=255) tgtccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTa < 1:3470156‑M2/26‑1 (MQ=255) aaaTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttgga > 1:6970985‑M2/1‑28 (MQ=255) tccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTAtt > 1:5332622‑M2/24‑51 (MQ=255) aTAGCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacg > 1:3261930‑M2/1‑26 (MQ=255) ccaactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTg < 1:2310346‑M2/29‑1 (MQ=255) caactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGt > 1:6561760‑M2/22‑51 (MQ=255) gCCCACCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatg < 1:1215172‑M2/51‑29 (MQ=255) aactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGtt > 1:3979676‑M2/21‑51 (MQ=255) aactttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGtt > 1:3389217‑M2/21‑51 (MQ=255) cccTCCACGCCTGCAATCAGCAtgtactgcacccattttgttggacgatga > 1:1130327‑M2/1‑22 (MQ=255) actttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTc < 1:5540018‑M2/32‑1 (MQ=255) ctttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTNa < 1:1567544‑M2/33‑1 (MQ=255) tttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCaa < 1:5785560‑M2/34‑1 (MQ=255) tttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCaa > 1:4907463‑M2/18‑51 (MQ=255) tttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCaa < 1:2679845‑M2/34‑1 (MQ=255) ttttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAAc > 1:1781966‑M2/17‑51 (MQ=255) tttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACg > 1:6885199‑M2/16‑51 (MQ=255) ccacGCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatg < 1:3902555‑M2/51‑34 (MQ=255) ttggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGc > 1:558519‑M2/15‑51 (MQ=255) cacGCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatgg < 1:6715836‑M2/51‑35 (MQ=255) tggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCa > 1:5010036‑M2/14‑51 (MQ=255) tggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCa < 1:1248927‑M2/38‑1 (MQ=255) ggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCAt < 1:1661657‑M2/39‑1 (MQ=255) ggggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCAt < 1:4867570‑M2/39‑1 (MQ=255) gggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATa < 1:3135044‑M2/40‑1 (MQ=255) gggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATa < 1:5471836‑M2/40‑1 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat < 1:84296‑M2/51‑38 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat < 1:2118948‑M2/51‑38 (MQ=255) gCCTGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaat > 1:6412519‑M2/1‑14 (MQ=255) ggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATaa > 1:2009809‑M2/11‑51 (MQ=255) ggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATaa < 1:3884559‑M2/41‑1 (MQ=255) ggtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATaa < 1:795672‑M2/41‑1 (MQ=255) gtcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAg < 1:5031984‑M2/42‑1 (MQ=255) tcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGt < 1:4207125‑M2/43‑1 (MQ=255) tcagtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGt < 1:6819481‑M2/43‑1 (MQ=255) tGCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagc < 1:4489011‑M2/51‑41 (MQ=255) gCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagcc < 1:4732628‑M2/51‑42 (MQ=255) gCAATCAGCAtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:2610206‑M2/1‑10 (MQ=255) agtacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTcc < 1:5193868‑M2/45‑1 (MQ=255) aaTCAGCAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:430033‑M2/51‑44 (MQ=255) tacaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCg > 1:2104963‑M2/5‑51 (MQ=255) tCAGCAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:7269854‑M2/1‑6 (MQ=255) acaGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGa > 1:3849192‑M2/4‑51 (MQ=255) cAGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:2478104‑M2/1‑5 (MQ=255) cAGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:684779‑M2/51‑47 (MQ=255) aGCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:7076014‑M2/1‑4 (MQ=255) gCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:6962613‑M2/1‑3 (MQ=255) gCAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5266395‑M2/51‑49 (MQ=255) gCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGCCCCGACca > 1:5672198/1‑51 (MQ=255) | TGCCGGATATCCTCCTTTCTGCATGAAATAGCCCACCACGCCTGCAATCAGCATAATGCCAACATCAAAAAGGCTATTGTTCAACGCATAAGTCCCGACCA > REL606/3990337‑3990437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |