| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,102,032 | IS150 (–) +3 bp | coding (756‑758/1065 nt) | phoH → | conserved protein with nucleoside triphosphate hydrolase domain |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 83 (1.040) | 50/100 | 0.3 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | = 1102034 | 0 (0.000) | coding (758/1065 nt) | phoH | conserved protein with nucleoside triphosphate hydrolase domain | |||||
| * | ? | REL606 | 664688 = | NA (NA) | 82 (1.030) | 56/100 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1102032 = | 0 (0.000) | coding (756/1065 nt) | phoH | conserved protein with nucleoside triphosphate hydrolase domain | |||||
Only 100 of 173 total aligned reads displayed.
GCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATG > REL606/1101984‑1102084 | cgcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAt < 1:6023382‑M2/51‑2 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAg > 1:4756468‑M2/48‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAgg > 1:2613497‑M2/47‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAgg < 1:2450706‑M2/5‑1 (MQ=255) gcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtg > 1:319966‑M2/1‑49 (MQ=255) gcTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtg < 1:5477556‑M2/51‑3 (MQ=255) cTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgt < 1:3833453‑M2/51‑4 (MQ=255) ttAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgta < 1:2194955‑M2/51‑5 (MQ=255) ttAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgta < 1:2685050‑M2/51‑5 (MQ=255) ttAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgta < 1:488223‑M2/51‑5 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTgg > 1:1614190‑M2/44‑51 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGa < 1:6294478‑M2/9‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGaa < 1:521469‑M2/10‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAAt < 1:6407322‑M2/12‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAAtt < 1:5749314‑M2/13‑1 (MQ=255) cTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccc > 1:6027278‑M2/1‑40 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTg > 1:5286126‑M2/38‑51 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgcg > 1:2252747‑M2/36‑51 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgcg > 1:5340440‑M2/36‑51 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTgcgc < 1:2834838‑M2/17‑1 (MQ=255) ccTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaa > 1:6885634‑M2/1‑37 (MQ=255) ccTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaa > 1:7247360‑M2/1‑37 (MQ=255) cTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaa < 1:839159‑M2/51‑16 (MQ=255) cTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaa < 1:554482‑M2/51‑16 (MQ=255) cTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaa < 1:5715758‑M2/51‑16 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCg > 1:3965037‑M2/33‑51 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCg > 1:3120318‑M2/33‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGt > 1:638933‑M2/32‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGt < 1:2563963‑M2/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGt > 1:732645‑M2/32‑51 (MQ=255) ttATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaa < 1:1365099‑M2/51‑18 (MQ=255) ttATGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaa > 1:5575013‑M2/1‑34 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGtt > 1:3181931‑M2/31‑51 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGtt > 1:4210763‑M2/31‑51 (MQ=255) aTGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagt > 1:6939082‑M2/1‑32 (MQ=255) aTGCAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagt > 1:5576903‑M2/1‑32 (MQ=255) atcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGc > 1:582569‑M2/28‑51 (MQ=255) tcgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGcc > 1:6462973‑M2/27‑51 (MQ=255) cAGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgg < 1:7223102‑M2/51‑23 (MQ=255) cgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCt > 1:1230997‑M2/26‑51 (MQ=255) cgtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCt > 1:1020569‑M2/26‑51 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga < 1:5797272‑M2/51‑24 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga > 1:6158074‑M2/1‑28 (MQ=255) aGTACTGCCTGCGACCGGAAATAGGGAAtgtactgaccccaaaaagttgga > 1:1815137‑M2/1‑28 (MQ=255) gtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCta < 1:1558479‑M2/27‑1 (MQ=255) gtccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCta > 1:6893020‑M2/25‑51 (MQ=255) tccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCtat < 1:7153085‑M2/28‑1 (MQ=255) tccaacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCtat < 1:3332915‑M2/28‑1 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt < 1:3181990‑M2/51‑28 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt > 1:5078631‑M2/1‑24 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt < 1:853246‑M2/51‑28 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt > 1:3526841‑M2/1‑24 (MQ=255) ctgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagt > 1:3921266‑M2/1‑24 (MQ=255) caacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTatat > 1:5700192‑M2/22‑51 (MQ=255) caacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTatat < 1:1652960‑M2/30‑1 (MQ=255) tgcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtt < 1:115630‑M2/51‑29 (MQ=255) aacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATg > 1:3026713‑M2/21‑51 (MQ=255) aacaaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATg < 1:7202313‑M2/31‑1 (MQ=255) gcctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtta > 1:4607452‑M2/1‑22 (MQ=255) cctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaa < 1:6096642‑M2/51‑31 (MQ=255) cctgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtta > 1:6977777‑M2/1‑21 (MQ=255) caaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCg < 1:2974087‑M2/33‑1 (MQ=255) caaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCg > 1:7102839‑M2/19‑51 (MQ=255) aaaatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGt > 1:6228900‑M2/18‑51 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac < 1:4559724‑M2/51‑33 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac < 1:5816311‑M2/51‑33 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaac > 1:525659‑M2/1‑19 (MQ=255) tgcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagtta > 1:4169224‑M2/1‑19 (MQ=255) gcGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaaca < 1:5976749‑M2/51‑34 (MQ=255) aatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTgg > 1:5210179‑M2/16‑51 (MQ=255) aatgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTgg < 1:2125473‑M2/36‑1 (MQ=255) cGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacac > 1:5151851‑M2/1‑17 (MQ=255) cGACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacac < 1:4117359‑M2/51‑35 (MQ=255) atgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGa < 1:492852‑M2/37‑1 (MQ=255) atgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGa > 1:4964978‑M2/15‑51 (MQ=255) tgggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGAc > 1:4229774‑M2/14‑51 (MQ=255) gACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacg > 1:2683608‑M2/1‑16 (MQ=255) gACCGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaa < 1:5386768‑M2/46‑31 (MQ=255) ggtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGt > 1:4282947‑M2/12‑51 (MQ=255) ccGGAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacgag < 1:5644489‑M2/51‑38 (MQ=255) gtgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTa < 1:6501167‑M2/41‑1 (MQ=255) tgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTAc > 1:3527816‑M2/10‑51 (MQ=255) tgcagtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTAc > 1:5911446‑M2/10‑51 (MQ=255) ggAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:961312‑M2/51‑40 (MQ=255) gAAATAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:6807450‑M2/51‑41 (MQ=255) aaaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcat > 1:6598146‑M2/1‑10 (MQ=255) aaaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcat > 1:6660727‑M2/1‑10 (MQ=255) aaaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcat > 1:1041633‑M2/1‑10 (MQ=255) aaaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcat > 1:2371144‑M2/1‑10 (MQ=255) agtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCtt < 1:6991413‑M2/45‑1 (MQ=255) agtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCtt > 1:3748399‑M2/7‑51 (MQ=255) aaTAGGGAAtgtactgaccccaaaaagttggacagttaaacacgaggcata < 1:1427480‑M2/51‑43 (MQ=255) gtacaGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCttt > 1:2009986‑M2/6‑51 (MQ=255) caGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGaa < 1:4658321‑M2/49‑1 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:2954797‑M2/51‑49 (MQ=255) gAAtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:4286744‑M2/51‑49 (MQ=255) gAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGaaaa < 1:971887/51‑1 (MQ=255) aGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGaaaa > 1:6244595/1‑49 (MQ=255) aGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATg > 1:6605802/1‑51 (MQ=255) aGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATg > 1:3720304/1‑51 (MQ=255) | GCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATG > REL606/1101984‑1102084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |