Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 651,703 +GAA :: IS150 (+) +2 bp intergenic (‑83/+176) ybeB ← / ← phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 651703 =0 (0.000)91 (1.140) 57/100 0.1 100% intergenic (‑83/+177) ybeB/phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase
?REL606 = 666130 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 6517040 (0.000)83 (1.090)
+GA
55/96 0.1 100% intergenic (‑84/+176) ybeB/phpB hypothetical protein/predicted alpha‑ribazole‑5'‑P phosphatase
?REL606 3651090 = NA (NA)intergenic (‑32/‑48) hokA/insJ‑4 toxic polypeptide, small/IS150 hypothetical protein

Only 100 of 178 total aligned reads displayed.

ATGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTG  >  REL606/651653‑651752
                                                  |                                                 
aTGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGcc                                                   <  1:4550141/51‑1 (MQ=255)
aTGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGcc                                                   >  1:2655449/1‑51 (MQ=255)
 tGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCg                                                  >  1:1919383/1‑51 (MQ=255)
 agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCg                                                  >  1:2978070‑M1/50‑51 (MQ=255)
   gTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGga                                                >  1:6264963‑M1/1‑49 (MQ=255)
   gTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGga                                                <  1:1153737‑M1/51‑3 (MQ=255)
   acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGaa                                                >  1:3862632‑M1/48‑51 (MQ=255)
    tCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaa                                               >  1:5613894‑M1/1‑48 (MQ=255)
    tCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaa                                               >  1:6669634‑M1/1‑48 (MQ=255)
    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAAt                                               <  1:3392173‑M1/5‑1 (MQ=255)
    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAAt                                               <  1:6214880‑M1/5‑1 (MQ=255)
    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAAt                                               <  1:4996445‑M1/5‑1 (MQ=255)
    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAAt                                               <  1:2675783‑M1/5‑1 (MQ=255)
    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAAt                                               <  1:5172507‑M1/5‑1 (MQ=255)
     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATc                                              <  1:2300800‑M1/6‑1 (MQ=255)
     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATc                                              >  1:4426428‑M1/46‑51 (MQ=255)
     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATc                                              >  1:5858798‑M1/46‑51 (MQ=255)
     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATc                                              <  1:4825319‑M1/6‑1 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                              <  1:4239718‑M1/51‑5 (MQ=255)
     cTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaat                                              >  1:484146‑M1/1‑47 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                             <  1:488403‑M1/7‑1 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                             >  1:5559758‑M1/45‑51 (MQ=255)
      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCg                                             >  1:6855330‑M1/45‑51 (MQ=255)
      tGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatg                                             >  1:5081068‑M1/1‑46 (MQ=255)
       gTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgt                                            <  1:3359016‑M1/51‑7 (MQ=255)
         cAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtac                                          >  1:4307170‑M1/1‑43 (MQ=255)
         atgcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCt                                          <  1:2854192‑M1/10‑1 (MQ=255)
           gcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCttt                                        >  1:2254185‑M1/40‑51 (MQ=255)
           gcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCttt                                        <  1:7215786‑M1/12‑1 (MQ=255)
           gcctcgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCttt                                        <  1:2273788‑M1/12‑1 (MQ=255)
            tataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgc                                       >  1:152206‑M1/1‑40 (MQ=255)
            tataCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgc                                       >  1:1013566‑M1/1‑40 (MQ=255)
              taCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcac                                     >  1:3730727‑M1/1‑38 (MQ=255)
              taCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcac                                     >  1:7053495‑M1/1‑38 (MQ=255)
              taCCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgca                                      <  1:1123122‑M1/50‑13 (MQ=255)
               cgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaa                                    <  1:1320168‑M1/16‑1 (MQ=255)
               cgtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaa                                    <  1:6214866‑M1/16‑1 (MQ=255)
                gtgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGaaa                                   <  1:92472‑M1/17‑1 (MQ=255)
                ccTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcaccc                                   <  1:1557041‑M1/51‑16 (MQ=255)
                 tgtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAg                                  >  1:698687‑M1/34‑51 (MQ=255)
                 cTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcaccca                                  >  1:4912883‑M1/1‑35 (MQ=255)
                  tGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccat                                 >  1:6361522‑M1/1‑34 (MQ=255)
                  tGAACCAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccat                                 <  1:6492726‑M1/51‑18 (MQ=255)
                  gtttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGt                                 <  1:2470351‑M1/19‑1 (MQ=255)
                   tttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTg                                >  1:4483499‑M1/32‑51 (MQ=255)
                    ttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTgg                               <  1:7160708‑M1/21‑1 (MQ=255)
                    ttaactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTgg                               <  1:2180439‑M1/21‑1 (MQ=255)
                     taactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTggg                              >  1:6383564‑M1/30‑51 (MQ=255)
                     taactgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTggg                              <  1:2009536‑M1/22‑1 (MQ=255)
                       cAGAGGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgt                            <  1:413593‑M1/51‑23 (MQ=255)
                       actgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCt                            <  1:1224132‑M1/24‑1 (MQ=255)
                       actgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCt                            <  1:6405913‑M1/24‑1 (MQ=255)
                       actgtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCt                            <  1:2517715‑M1/24‑1 (MQ=255)
                          gtccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatc                         <  1:2334208‑M1/27‑1 (MQ=255)
                          agGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttgg                         >  1:1674890‑M1/1‑26 (MQ=255)
                          agGCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttgg                         <  1:2214508‑M1/51‑26 (MQ=255)
                           tccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatca                        >  1:1381075‑M1/24‑51 (MQ=255)
                           ggCGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttgga                        >  1:5523408‑M1/1‑25 (MQ=255)
                            ccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatcat                       <  1:6110316‑M1/29‑1 (MQ=255)
                            ccaactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTatcat                       >  1:1785345‑M1/23‑51 (MQ=255)
                             cGATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacg                      <  1:4062446‑M1/51‑29 (MQ=255)
                              gATTTCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacga                     >  1:5595887‑M1/1‑22 (MQ=255)
                              aactttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATcc                     <  1:700951‑M1/31‑1 (MQ=255)
                               actttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATccc                    >  1:5451670‑M1/20‑51 (MQ=255)
                                 tttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAc                  <  1:4219636‑M1/34‑1 (MQ=255)
                                 tttttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAc                  >  1:4350594‑M1/18‑51 (MQ=255)
                                 ttCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatga                  >  1:3706677‑M1/1‑19 (MQ=255)
                                 ttCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatga                  <  1:5710735‑M1/51‑33 (MQ=255)
                                 ttCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatga                  <  1:6553246‑M1/51‑33 (MQ=255)
                                  tCGGGACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaa                 <  1:4781945‑M1/51‑34 (MQ=255)
                                   tttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAccc                >  1:1842573‑M1/16‑51 (MQ=255)
                                   tttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAccc                >  1:6304054‑M1/16‑51 (MQ=255)
                                    ttggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCAcccc               >  1:3149273‑M1/15‑51 (MQ=255)
                                    gggACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaat               >  1:873503‑M1/1‑16 (MQ=255)
                                     tggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcg              >  1:3631415‑M1/14‑51 (MQ=255)
                                     tggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcg              <  1:4172866‑M1/38‑1 (MQ=255)
                                      ggggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcgc             >  1:3445816‑M1/13‑51 (MQ=255)
                                      gACAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatgg             <  1:1038886‑M1/51‑38 (MQ=255)
                                       gggtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCcgcg            <  1:6727223‑M1/40‑1 (MQ=255)
                                        cAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaa           <  1:4345149‑M1/51‑40 (MQ=255)
                                        cAATTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaa           >  1:1841900‑M1/1‑12 (MQ=255)
                                         gtcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgcc          >  1:3797673‑M1/10‑51 (MQ=255)
                                         aaTTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaat          <  1:6782770‑M1/51‑41 (MQ=255)
                                         aaTTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaat          <  1:5122150‑M1/51‑41 (MQ=255)
                                          tcagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccg         >  1:3215492‑M1/9‑51 (MQ=255)
                                          aTTGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaata         >  1:1239131‑M1/1‑10 (MQ=255)
                                           ttGTCGCCGgaatgtactgcacccattttgttggacgatgaaatggaatag        <  1:7278493‑M1/51‑43 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccgc        <  1:7194537‑M1/44‑1 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccgc        <  1:4545080‑M1/44‑1 (MQ=255)
                                           cagtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGcgccgc        >  1:1573527‑M1/8‑51 (MQ=255)
                                            agtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCa       >  1:2757100‑M1/7‑51 (MQ=255)
                                            agtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCa       <  1:5505961‑M1/45‑1 (MQ=255)
                                             gtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAg      >  1:2964782‑M1/6‑51 (MQ=255)
                                             gtacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAg      >  1:3586058‑M1/6‑51 (MQ=255)
                                              tacaCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGa     >  1:7120874‑M1/5‑51 (MQ=255)
                                              tCGCCGgaatgtactgcacccattttgttggacgatgaaatggaatagccc     <  1:5805601‑M1/51‑46 (MQ=255)
                                               cGCCGgaatgtactgcacccattttgttggacgatgaaatggaatagcccc    <  1:4639421‑M1/51‑47 (MQ=255)
                                                gCCGgaatgtactgcacccattttgttggacgatgaaatggaatagcccct   <  1:2141397‑M1/51‑48 (MQ=255)
                                                 ccGgaatgtactgcacccattttgttggacgatgaaatggaatagccccta  <  1:2108636‑M1/51‑49 (MQ=255)
                                                 aCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTg  >  1:6190333‑M1/2‑51 (MQ=255)
                                                  |                                                 
ATGGTCTGTCAGTATACCTGAACCAGAGGCGATTTCGGGACAATTGTCGCCGAATCGGCTTTCGAAAGTGGGCTATCATCCCACCCCGCGCCGCAGATTG  >  REL606/651653‑651752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.