| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 588495 = | NA (NA) | 161 (2.110) | 75/96 | 0.0 | NA | noncoding (1/1977 nt) | IS150 | repeat region |
| ? | REL606 | 589936 = | NA (NA) | noncoding (387/768 nt) | IS1 | repeat region | |||||
Only 100 of 399 total aligned reads displayed.
GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588546‑588495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > REL606/589936‑589985 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:3748456/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:6535783/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:5702412/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:5332225/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:4801998/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:1842271/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:4205480/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:1408321/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:1800205/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:282596/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:2540186/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:2458911/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:2110926/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:2040270/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGCGCAGTAC > 1:4526676/1‑51 ANATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:718863/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:1791973/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:3282241/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:856344/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:5353564/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:1257253/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:3321422/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:3973704/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:94818/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:6104960/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:557050/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:2378673/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:2416467/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:6176416/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:2497318/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:3103481/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:2561886/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:6661471/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:6985569/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:6862565/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:4366693/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:4294011/51‑1 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC > 1:4939853/1‑51 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC > 1:1307853/1‑51 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACT > 1:4498797/1‑51 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACT > 1:5174479/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTG < 1:2284219/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTG < 1:4761857/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT > 1:1535794/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT < 1:1777397/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT < 1:3919423/51‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTT > 1:5266114/1‑51 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCG < 1:2991999/51‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGT < 1:7092125/51‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGT < 1:1456396/51‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCC > 1:3218164/1‑51 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCAT < 1:3637744/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATT > 1:7257595/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTT < 1:2873813/51‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCC > 1:7053895/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGC > 1:5543308/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGC > 1:590663/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGC < 1:6739700/51‑1 TTCATCGTCCAACAAAATGGGTGCAGTACACCGTTCGTCCATTTCCGCGCA > 1:4554787/1‑51 TCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAG < 1:5351236/51‑1 TCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAG > 1:4606971/1‑51 CATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGA > 1:1950830/1‑51 ATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGAC > 1:394252/1‑51 GTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGAT > 1:4088869/1‑51 GTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGAT < 1:2723638/51‑1 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG < 1:3840237/51‑1 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG < 1:6022891/51‑1 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAG < 1:5629830/45‑1 CCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGA > 1:3504853/1‑51 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:5807397/51‑1 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT > 1:2217080/1‑51 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:1011910/51‑1 ATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTG > 1:1891707/1‑51 ATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTG > 1:4887489/1‑51 GGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCC > 1:1691185/1‑51 TGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGG < 1:1342456/51‑1 CAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCT < 1:4421628/51‑1 CAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCT > 1:4019974/1‑51 CAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCT > 1:5460890/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:3047220/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:1491919/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:41569/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:192712/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:4687296/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:3159494/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:781201/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:1719947/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:1085748/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:2357633/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:2942288/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:4864402/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:2763816/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:6912018/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:5070477/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > 1:1181280/1‑51 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:2126453/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:1275826/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:6234655/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > 1:4124478/1‑51 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:6376157/51‑1 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588546‑588495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > REL606/589936‑589985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |