| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,522,900 | IS150 (–) +3 bp | 100% | coding (255‑257/2019 nt) | hyfB → | NADH dehydrogenase subunit N |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 18 (0.670) | 13/278 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | = 2522902 | 0 (0.000) | coding (257/2019 nt) | hyfB | NADH dehydrogenase subunit N | |||||
| * | ? | REL606 | 2522900 = | 0 (0.000) | 17 (0.640) | 16/278 | NT | 100% | coding (255/2019 nt) | hyfB | NADH dehydrogenase subunit N |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
CATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACAACGCTTTT > REL606/2522758‑2523050 | caTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtac > 1:454035‑M2/1‑145 (MQ=255)caTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtac < 2:442961‑M2/150‑6 (MQ=255)caTCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtac > 1:72745‑M2/1‑145 (MQ=255)agtcgCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtac > 2:642436‑M2/3‑145 (MQ=255) tCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTCACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactg > 1:189060‑M2/1‑143 (MQ=255) tCGCTGGTGGGCGGCGTGATTGGAATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactg > 1:288509‑M2/1‑143 (MQ=255) gtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGttatttc < 1:512316‑M1/12‑4 (MQ=255) gtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTAtctc > 1:138508‑M1/139‑150 (MQ=255) tgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTcc > 2:619867‑M1/138‑150 (MQ=255) cattctcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggaattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTTGTTATCTCCTTGCTGGTGGTGGTTTGTtc > 1:397484‑M1/118‑150 (MQ=255) catcaGCGGAATTACGCAATTACATGCTGGTTTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGACTCTCGGCATTTTTGGTGCTtgtactgaccccaaaaagttggacagttaaaca < 1:25848‑M2/150‑34 (MQ=255) catcaGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaaca > 2:524347‑M2/1‑117 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTAt < 2:340706‑M1/40‑1 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTAtt < 1:76885‑M1/41‑1 (MQ=255) gtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCAt > 2:77111‑M1/107‑150 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTg > 1:625436‑M1/105‑150 (MQ=255) ttACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 2:218108‑M2/1‑106 (MQ=255) aggtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGa > 2:418311‑M1/104‑150 (MQ=255) gtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGaca < 1:417123‑M1/49‑2 (MQ=255) aCGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 2:380551‑M2/1‑104 (MQ=255) aTTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga < 2:348876‑M2/150‑52 (MQ=255) aTTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga < 2:443021‑M2/150‑52 (MQ=255) tACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgatt > 1:441711‑M2/1‑97 (MQ=255) agagacagggtgtaacttTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgatt > 1:603329‑M2/9‑97 (MQ=255) ggTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattctgtctct < 2:605101‑M2/150‑62 (MQ=255) ggTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt < 1:103493‑M2/150‑62 (MQ=255) cttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCaaa < 2:409648‑M1/73‑1 (MQ=255) gtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCgcggcggcg < 1:60041‑M1/85‑1 (MQ=255) tGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaat > 1:589635‑M2/1‑66 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAat < 2:384084‑M1/103‑1 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAat < 2:265714‑M1/103‑1 (MQ=255) gCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTtggactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgc > 1:347879‑M2/1‑47 (MQ=255) aaCCCTGCGAATGGATATGCTCTCGGCATTTATGGTGCTtgtactgaccccaaacagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtag > 1:113138‑M2/1‑39 (MQ=255) agggatAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 1:322776‑M2/3‑29 (MQ=255) aTGGATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 2:103796‑M2/1‑29 (MQ=255) ggATAGCCTCTCGGCATTTATGGTGCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatct < 2:323688‑M2/150‑124 (MQ=255) ccaacaaaatgggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGccc > 2:513786‑M1/23‑150 (MQ=255) gtgtataagagacagcttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacag > 2:495074‑M2/15‑17 (MQ=255) gggtgcagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGAt > 2:512082‑M1/13‑150 (MQ=255) cagtacaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACa < 2:409428‑M1/143‑1 (MQ=255) acaGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACAACGc > 2:479480‑M1/4‑150 (MQ=255) cTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagctgtctcttatacac < 1:493668‑M2/150‑149 (MQ=255) cTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgc < 1:645505‑M2/150‑149 (MQ=255) | CATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCACCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACAACGCTTTT > REL606/2522758‑2523050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |