| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2655704 | 0 (0.000) | 22 (0.830) | 19/276 | NT | 100% | intergenic (‑123/+7) | clpB/yfiH | protein disaggregation chaperone/hypothetical protein |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
TTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGG > REL606/2655555‑2655850 | tttATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTc < 2:409506/150‑1 (MQ=255) taGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtac < 2:632251‑M1/150‑6 (MQ=255) taGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtac < 1:568657‑M1/150‑6 (MQ=255) aGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcac > 2:199610‑M1/1‑140 (MQ=255) cGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttgg > 2:411457‑M1/1‑128 (MQ=255) tccCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTTCtgtactgcacccattttgttggacgatgaaat > 2:605843‑M1/1‑118 (MQ=255) tccCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatg > 2:559157‑M1/1‑117 (MQ=255) cccATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatgg > 2:480044‑M1/1‑116 (MQ=255) ccATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatgga > 2:318303‑M1/1‑115 (MQ=255) gATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccc > 2:401804‑M1/1‑107 (MQ=255) aaGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:478686‑M1/150‑49 (MQ=255) gaTTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 2:587671‑M1/1‑88 (MQ=255) attCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 2:587644‑M1/1‑63 (MQ=255) attCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGAAACGTCTTGA‑TTCtgtactgcacccatttagttgtacgatgaaatggaatagcccctaatatggtacagccaacatagccttgtgaaaagcgctttgaag > 1:561434‑M1/1‑63 (MQ=255) aGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg > 2:256402‑M1/1‑58 (MQ=255) ttATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat < 1:557541‑M1/150‑96 (MQ=255) aCCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactac < 1:585945‑M1/150‑102 (MQ=255) aGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttc > 2:307342‑M1/1‑46 (MQ=255) aTTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcac < 1:255670‑M1/150‑107 (MQ=255) aaTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac < 2:641909‑M1/150‑110 (MQ=255) aaTGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac < 1:199037‑M1/150‑110 (MQ=255) gTACCGGATCGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcat > 2:413516‑M1/1‑20 (MQ=255) cGTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacg < 2:619636‑M1/150‑140 (MQ=255) gTCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgt > 1:330424‑M1/1‑10 (MQ=255) tCTTGA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgtt > 2:195060‑M1/1‑9 (MQ=255) gA‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttgg > 2:27698‑M1/1‑5 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgcagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 1:53165‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgacgtcgtgaatcactacttcacaactgatgttggttacaggatcatctcggcaagttttggt > 1:670952‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 1:134540‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 2:387498‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 2:326863‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 2:664089‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 2:176773‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaataagtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcgtctcggcacgttttggt > 2:468891‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaagttgtcaacgccaaaatacccttttgaaaagccccttgacgtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttggt > 1:26972‑M1/1‑4 (MQ=255) a‑TTCtgtactgcacccattttgttggacgatgaaatggaatagcacttaatatgtcgaagacaaaatacccttttgaaaagcaccttgaagtcgtgaatcactacttcacaactgatgatggttacatgatcatcgcggcacgttttggt > 1:539336‑M1/1‑4 (MQ=255) | TTTATTAGTAAGACGATCCAGACGCATAACTCCTCCCATAACGGATCAAAGTTGCTACTGGAGATTAAATGAGGTCATCCCTCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGA‑TTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGG > REL606/2655555‑2655850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |