| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | 100% | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1218697 = | 0 (0.000) | 28 (1.060) | 22/276 | NT | 100% | coding (1209/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 21 (0.790) | 16/278 | NT | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
TCAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTC > REL606/1218555‑1218846 | tCAGTTTCCGGGACAGTCTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTCAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtac < 1:39107‑M1/150‑6 (MQ=255)tCAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtac < 1:209865‑M1/150‑6 (MQ=255) ttCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac < 1:207812‑M1/150‑11 (MQ=255) atgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCt > 2:125021‑M1/137‑150 (MQ=255) tGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatt < 2:548108‑M1/150‑16 (MQ=255) gTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaaccattttgtt > 1:650767‑M1/1‑130 (MQ=255) atatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:267707‑M1/27‑1 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt < 2:83401‑M1/29‑1 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt < 1:139643‑M1/29‑1 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgcgtttaactgaccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt < 1:58333‑M1/29‑1 (MQ=255) attgaatactacaacagcagaagaattagcctgaaattaaaaggcctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTAt < 1:557318‑M1/31‑1 (MQ=255) tgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCt > 2:530579‑M1/118‑150 (MQ=255) gaatactacaacagcagaagaattagccttaaattaaaaggtctgactctaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttgtggtaagtacaTTTCGTTCCTGGCTACTTAGGGCTTTCTTATCtt < 1:566133‑M1/34‑1 (MQ=255) tactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAt < 1:546631‑M1/37‑1 (MQ=255) gATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgg < 2:652687‑M1/150‑35 (MQ=255) aTTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgga > 2:357141‑M1/1‑115 (MQ=255) acaacagcagaagaattagcctgaaattaaaaggcctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGAcc > 2:558932‑M1/110‑150 (MQ=255) cagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat > 2:565981‑M1/103‑150 (MQ=255) cagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat > 2:140045‑M1/103‑150 (MQ=255) gtcTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTTTGGTTCAGCTGTTCAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaagggaatagcccctaat < 1:624197‑M1/149‑48 (MQ=255) gagacaggtcaccgaGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 2:595929‑M1/143‑49 (MQ=255) aagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGa > 2:268468‑M1/100‑150 (MQ=255) gaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAtt > 2:657845‑M1/98‑150 (MQ=255) gTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatactgtctc > 1:594179‑M1/1‑95 (MQ=255) tgtataagagacagattgaatgttgatgaAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc < 1:325234‑M1/136‑59 (MQ=255) aCCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc < 1:356119‑M1/150‑59 (MQ=255) gaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAAt > 1:83162‑M1/88‑150 (MQ=255) aTTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccctgtctcttataca > 2:326158‑M1/1‑78 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGc > 2:566890‑M1/69‑150 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGc < 1:531829‑M1/82‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGa < 2:405158‑M1/102‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGa < 2:397910‑M1/102‑1 (MQ=255) agacagtgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAAt > 2:3490‑M1/47‑150 (MQ=255) gTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactact > 1:56596‑M1/1‑48 (MQ=255) gTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactact > 1:614140‑M1/1‑48 (MQ=255) gTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactact > 1:503566‑M1/1‑48 (MQ=255) ttGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactactt < 2:615942‑M1/150‑104 (MQ=255) aaCATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcac > 2:138051‑M1/1‑44 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCagaatctgtct < 1:3475‑M1/110‑6 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAAccc < 1:493260‑M1/110‑1 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac < 2:505001‑M1/150‑110 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTc < 2:416705‑M1/116‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTc < 2:591166‑M1/116‑1 (MQ=255) gCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatg > 2:384650‑M1/1‑36 (MQ=255) taactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGAt > 2:423993‑M1/30‑150 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTGCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTgtgt > 1:648662‑M1/25‑150 (MQ=255) gTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacagg < 2:56763‑M1/150‑126 (MQ=255) actttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTgg > 2:548215‑M1/20‑150 (MQ=255) gTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcat < 2:131682‑M1/150‑131 (MQ=255) ggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCtggctc < 1:544813‑M1/140‑3 (MQ=255) tcttgattttgtactgcccccatttttttggacgctgaaatggaatagccactaatatgtgaaagccaaaataaccttttgaatatcgccttgaagtcgtgaatcaacacttaacaactgatgatggttacaggatcatctcggcacgta > 1:607790‑M1/4‑9 (MQ=255) gtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTaaa < 2:607346‑M1/145‑1 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACttt < 1:150501‑M1/149‑1 (MQ=255) tttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTc > 2:197900/1‑150 (MQ=255) | TCAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTC > REL606/1218555‑1218846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |