| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 3464760 = | NA (NA) | 10 (0.240) +AATTAATTCC |
10/180 | 2.2 | 44.2% | intergenic (‑136/+165) | murB/rrfB | UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding/5S ribosomal RNA |
| ? | NC_007779 | = 3464932 | 14 (0.300) | noncoding (113/120 nt) | rrfB | 5S ribosomal RNA | |||||
CGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCT > NC_007779/3464832‑3465030 | ttaggcagtctgactctagtaTAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTgg < 1:1452600‑M2/80‑1 (MQ=255)tgcgcccgtgtgactctagtcGCGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTgg > 4:53491‑M2/22‑101 (MQ=255)tgatccagtgtgactctagtaGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTgg < 3:1605721‑M2/80‑1 (MQ=255)tgatacagtgtgcctctagtaGAGAGCGTTCACCGACAAAAAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTgg < 1:979902‑M2/80‑1 (MQ=255) ggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGc > 3:1504936/1‑101 (MQ=32) ggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaa < 3:303660‑M2/101‑5 (MQ=255) ccagtgtgactctagtaGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgcact < 1:1319026‑M2/84‑3 (MQ=255) gATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaat > 1:828983‑M2/1‑96 (MQ=255) gATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaat > 1:434881‑M2/1‑96 (MQ=255) gATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGtt > 1:469007/1‑101 (MQ=32) cagtgtgactctagtaGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTGCGTTGGAGGTGAGGCCTggcacta < 4:99107‑M2/85‑4 (MQ=255) tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattggg < 1:1078739‑M2/101‑10 (MQ=255) tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattggg < 1:1473043‑M2/101‑10 (MQ=255) gTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaatt > 3:1234588‑M2/1‑91 (MQ=255) tCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaa > 1:782842‑M2/1‑90 (MQ=255) cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCg > 2:35158/1‑101 (MQ=32) agagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttga < 3:146390‑M2/101‑23 (MQ=255) gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttat > 3:914164‑M2/1‑78 (MQ=255) agCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatg > 3:513988‑M2/1‑77 (MQ=255) agCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGga > 1:499518/1‑101 (MQ=38) ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacga < 1:510631‑M2/101‑29 (MQ=255) ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAcc > 3:265541/1‑101 (MQ=35) aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaag < 3:442008‑M2/101‑32 (MQ=255) cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca > 3:582395/1‑101 (MQ=38) gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggc < 1:1368639‑M2/101‑35 (MQ=255) gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatggcggggggcccgcccgccccc < 3:904869‑M2/101‑46 (MQ=255) tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCt > 3:1318779/1‑101 (MQ=38) aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcct > 3:1016358‑M2/1‑53 (MQ=255) aaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgccta < 3:461603‑M2/101‑50 (MQ=255) gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttt > 3:1488131‑M2/1‑48 (MQ=255) ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggt < 1:143100‑M2/101‑61 (MQ=255) cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt > 3:1461041/1‑101 (MQ=35) cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt > 3:1181259/1‑101 (MQ=38) gTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggttaa < 1:55462‑M2/101‑64 (MQ=255) cTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa < 4:35130/101‑1 (MQ=35) tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaa > 1:895734‑M2/1‑35 (MQ=255) ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggttaatgtc > 1:201768‑M2/1‑34 (MQ=255) tctgactGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcttggcagtttatggcgggcgtccggcccgccaccctccgggccgttgcttcgcaac > 3:1170772‑M2/4‑34 (MQ=255) gACTGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatggcgggcgtccttcccccccccctcccggccgcttccttggcaacag < 1:1159664‑M2/101‑71 (MQ=255) gACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg > 3:1027879/1‑101 (MQ=32) tGAGCCTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatggga > 3:1088911‑M2/1‑28 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatggcggggggcctgccccccccccccccggcccgtgcttcgcaaccttcaa < 3:790949‑M2/101‑74 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGggaattaattcctggcagtttatggcgggcgtcctgcccgccacccttcgggccgttgcttcgcaacgttcaa > 3:1583748‑M2/1‑28 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa > 3:1204025/1‑101 (MQ=32) gCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg < 1:755077/101‑1 (MQ=32) cTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgggaagatc < 3:388531‑M2/101‑79 (MQ=255) cTTTCGTTTTATTTGATGCCTGGggaattgggaattaattcttgaagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgggaagatc > 1:457664‑M2/1‑23 (MQ=255) tttATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg > 3:681550/1‑101 (MQ=32) tGCCTGGggaattaattcctggcagtttgtggcgggcgtcctgcccgcccccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgt > 3:593299‑M2/1‑7 (MQ=255) tGGggaattaattcctggcagtttatggcgggcgtcctcccccccacccccccggccgttgcttctcaacgttcaaatccccttcccgcggggttgtccta < 1:641760‑M2/101‑99 (MQ=255) | CGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCT > NC_007779/3464832‑3465030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |