New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 555924 =NA (NA)39 (0.800) 27/62 0.4 coding (1209/2346 nt) ECB_00513 conserved hypothetical protein
?REL606 = 2035093 NA (NA)noncoding (1/768 nt) IS1 repeat region

TGCCATCCGATAAGGTTGTTAGCTTCAAACGCGCATCAGGTGCAACATAC  >  REL606/555899‑555948
                         |                        
tGCCATCCGATAAGGTTGTTAGCTTCAAACACACAt                >  1:5789414/1‑36 (MQ=1)
         aTAAGGTTGTTAGCTTCAAACGCGCATCAGCTCCaa       >  1:3790477/1‑36 (MQ=1)
              gttgttAGCTTCAAACGCGCATCACGTGCAccacac  >  1:3655730/1‑36 (MQ=1)
                         |                        
TGCCATCCGATAAGGTTGTTAGCTTCAAACGCGCATCAGGTGCAACATAC  >  REL606/555899‑555948

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 10 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG