New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 15973030 (0.590)15 (0.300) 10/62 2.7 36.1% coding (5/585 nt) yadN predicted fimbrial‑like adhesin protein
?REL606 1357552 = 23 (0.410)coding (4/1386 nt) ycjJ putrescine importer

AGCATAAGACCAGACAGGGCAAAACCTAATTTTTTAG..................................  >  REL606/159694‑159730
..................................TAGCCATAATTGCTGCCTCCCCTGCGTAATAAGGTTT  >  REL606/1357552‑1357585
                                                                       
     AAGACCAGACAGGGCAAAACCTAATTTTTTAGACA                                 <  1:15729689/35‑1 (MQ=255)
     AAGACCAGACAGGGCAAAACCTAATTTTTTAGACA                                 <  1:8046496/35‑1 (MQ=255)
      AGACCAGACAGGGCAAAACCTAATTTTTTAGACAT                                <  1:16166424/35‑1 (MQ=255)
       GACCAGACAGGGCAAAACCTAATTTTTTAGACATA                               >  1:11871270/1‑35 (MQ=255)
        ACCAGACAGGGCAAAACCTAATTTTTTAGACATAA                              <  1:7903266/35‑1 (MQ=255)
         CCAGACAGGGCAAAACCTAATTTTTTAGACATAAa                             >  1:10173072/1‑34 (MQ=255)
         CCAGACAGGGCAAAACCTAATTTTTTAGACATAAa                             >  1:14974846/1‑34 (MQ=255)
         CCAGACAGGGCAAAACCTAATTTTTTAGACATAAa                             <  1:9488975/35‑2 (MQ=255)
                          TAATTTTTTAGCCATAATTGCTGCCTCCCCTGCGT            <  1:2876031/35‑1 (MQ=255)
                          TAATTTATTAGCCATAATTGCTGCCTCCCCTGCGT            <  1:8281363/35‑1 (MQ=255)
                           AATTTTTTAGCCATAATTGCTGCCTCCCCTGCGTA           <  1:4455462/35‑1 (MQ=255)
                            ATTTTTTAGCCATAATTGCTGCCTCCCCTGCGTAA          <  1:11827370/35‑1 (MQ=255)
                             TTTATTAGCCATAATTGCTGCCTCCCCTGCGTAAT         <  1:12443962/35‑1 (MQ=255)
                              TTTTTAGCCATAATTGCTGCCTCCCCTGCGTAATA        <  1:10508763/35‑1 (MQ=255)
                                 TTAGCCATAATTTCTGCCTCCCCTGCGTAATAAGG     <  1:16078017/35‑1 (MQ=255)
                                                                       
AGCATAAGACCAGACAGGGCAAAACCTAATTTTTTAG..................................  >  REL606/159694‑159730
..................................TAGCCATAATTGCTGCCTCCCCTGCGTAATAAGGTTT  >  REL606/1357552‑1357585

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 22 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG