New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 37463521 (0.890)6 (0.260) 3/54 2.6 18.2% coding (11/192 nt) yaiA hypothetical protein
?REL606 = 3634629 33 (1.080)coding (591/903 nt) dppC dipeptide transporter

TCATCCCGTGAAATAAGGAAGAACGATGCCAACGAAACCGCCTTATCCTCGTGAAGCATATATAGTGACGA  >  REL606/374600‑374670
                                   |                                   
tCATCCCGTGAAATAAGGAAGAACGATGCCAACGaa                                     <  1:2699030/36‑1 (MQ=255)
tCATACCGTGAAATAAGGAAGAACGATGCCAACGaa                                     <  1:834734/36‑1 (MQ=255)
 cATCCCGTGAAATAAGGAAGAACGATGCCAACGaaa                                    >  1:1717001/1‑36 (MQ=255)
       gTGAAATAAGGAAGAACGATGCCACCGAAACCCCCt                              >  1:3372264/1‑36 (MQ=38)
       gTGAAATAAGGAAGAACGATGCCAACGAAACCGCCt                              >  1:3092241/1‑36 (MQ=255)
       gTGAAATAAGGAAGAACGATGCCAACGAAACCGCCt                              >  1:3157273/1‑36 (MQ=255)
       gTGAAATAAGGAAGAACGATGCCAACGAAACCGCCt                              >  1:494553/1‑36 (MQ=255)
       gTGAAATAAGGAAGAACGATGCCAACGAAACCGCCt                              <  1:162817/36‑1 (MQ=255)
         gAAATAAGGAAGAACGATGCCAACGAAACCGCCTTa                            <  1:784255/36‑1 (MQ=255)
          aaaTAAGGAAGAACGCTGCCAACGAAACCGCCTTAt                           >  1:882058/1‑36 (MQ=255)
            aaaaGGAAGAACGATGCCAACAAAACCGCCTTATcc                         <  1:4093461/34‑1 (MQ=37)
            aaaaGGAAGAACGATGCAAACGAAACCGCCTTATcc                         <  1:3472802/34‑1 (MQ=38)
            aTAAGAAAGAACGAGGCCAACGAAACCGCCTTATcc                         <  1:3116137/36‑1 (MQ=37)
             aaaGGAAGAACGATGCCAACGAAACCGCCTTATCCt                        <  1:3544511/35‑1 (MQ=255)
             aaaGGAAGAACGATGCCAACGAAACCGCCTTATCCt                        <  1:1539411/35‑1 (MQ=255)
              aaGGAAGAACGATGCCAACGAAACCGCCTTATCCTc                       <  1:1302110/36‑1 (MQ=255)
              aaGGAAGAACGAGGCCAACGAAACCGCCTTATCCTc                       <  1:2412726/36‑1 (MQ=255)
                 gaagaaCGATGCCAACGAAACCGCCTTATCCTcctt                    >  1:1243699/1‑33 (MQ=255)
                 gaagaaCGATGCCAACGAAACCGCCTTATCCTCGTg                    >  1:3051649/1‑36 (MQ=255)
                   atgacgaTGCCAACGAAtcaatgcccgtggcgggtg                  >  1:2833679‑M1/4‑17 (MQ=255)
                   agaaCGATGCCAACGAAACCGCCTTATCCTCGTGat                  >  1:2190315/1‑35 (MQ=255)
                   agaaCGATGCCAACGAAACCGCCTTATCCTCGTGaa                  <  1:2342103/36‑1 (MQ=255)
                   agaaCGATGCCAACGAAACCGCCTTATCCTCGTGaa                  >  1:1020559/1‑36 (MQ=255)
                    tgacgATGCCAACGAAtcaatgcccgtggcgggtgg                 >  1:2200432‑M1/3‑16 (MQ=255)
                    tgacgATGCCAACGAAtcaatgcccgtggcgggtgc                 >  1:75916‑M1/3‑16 (MQ=255)
                      aCGTTGGCAAGGAAGCCGCCTTATCCTCGTGAAGCa               <  1:1059692/36‑1 (MQ=19)
                      aCGATGCCAACGAAtcaatgcccgtggcgggtgccg               >  1:1170775‑M1/1‑14 (MQ=255)
                       cGATGCCAACGAAtcaatgcccgtggcgggtgccgg              >  1:1776442‑M1/1‑13 (MQ=255)
                       agATGCAAACGAAACCGCCTTATCCTCGTGAAGCat              <  1:2414755/35‑1 (MQ=255)
                        gATGCCAACGAAtcaatgcccgtggcgggtggcggg             >  1:1580079‑M1/1‑12 (MQ=255)
                        gATGCCAACGAAACCGCCTTATCCTCGTGAAGCata             >  1:32267/1‑36 (MQ=255)
                           gCCAACGAAACCGCCTTATCCTCGTGAAGCatatat          >  1:1987475/1‑36 (MQ=255)
                            ccAACGAAACCGCCTTATCCTCGTGAAGCAtatata         >  1:3715923/1‑36 (MQ=255)
                                agAAACAGCCTTATCCTCGTGAAGCATATATAGTGa     <  1:3351243/35‑1 (MQ=255)
                                   aaCCGCCTTATCCTCGTGAAGCATATATAGTGACGa  <  1:3604887/36‑1 (MQ=255)
                                   |                                   
TCATCCCGTGAAATAAGGAAGAACGATGCCAACGAAACCGCCTTATCCTCGTGAAGCATATATAGTGACGA  >  REL606/374600‑374670

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 15 ≤  ATCG  < 30 ≤  ATCG  < 40 ≤  ATCG